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scnpilot_p_inoc_scaffold_520_32

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 38313..39932

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor id=7718919 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 540.0
  • Bit_score: 1057
  • Evalue 0.0
  • rbh
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 432.0
  • Bit_score: 440
  • Evalue 4.80e-120
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 551.0
  • Bit_score: 359
  • Evalue 1.30e-96

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Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 1620
ATGAAACTTGGTATGAACCTCACTGCATCACTGCAGCAGACCCTCACGCCGCAGCAGATACAGTACCTCAAGCTCCTTCAACTGCCGACATTGCAACTGGAACAGCACGTCCGCGCCGAGATGGAGAACAATCCCATGCTCGAGGAAGCGCTGGCCGACGAAGCCGGCGAACGATCGCCCGATTCCCCATCCGAGCCCGAACTGGACCCCGGTACCGCACCCATGATGTCGGAACCCGCACCCATCATCGACTCGACGAACGAATCCACCGATCAGGTGTCGGCCGAAGACTACGATCCGAAGGACGCCTTCGAGTTCTACAAGCTGATCTGGGGCGAGGACCCGTCGGCCGGACGTTCGTCCGACGGACGTACGGGTGACGAGGAAGACGATGGTGAGGGATTCCAGTTCCGCAACGAAACGTCGTTCGAAGAAGACCTCATCGAACAGCTCCGCTTCCTGCCGATCAGCATCGAGGAACGACTGCTCGGAGAGTACATCGTCGGCAACGTGGACACCGACGGCTATCTCCGTCGCGATCTCTCCGAGATGGTCGACGAAGTGAATGCCTCGATCGCCGAACACAACCTCGCCCTGCAGGCACCCGCCCTGCTCGGGACGATGATGTCGGACATGGACAGTGCGATCATCGATGGCGTCGACCATACGCTGCAGCCTCTGTCGGCCCGCCAGTCCGAGTCGATGCTCAAGCGCATCCAGTCGCTCGACCCTCCGGGTGTGGCATCGCGCACCATCCAGGAATGCCTGCTGGCCCAGCTCCGCGCCGTACCGCGTCCGAACGCAGCACAAAAACTTGCCATCGCCGTGCTCGCCACCACGTACGATGCCTTCGCGATGAAGCACTATCACGTCATCGAGCGTCAGCTCGGTGTAACGGAAGACTACCTTCGCGAGGCTCTCGAAGTCATTCGTAAACTCAATCCGAAGCCAGGCGCCGGTACGTTCGGTCCGGAGATGAATACGGTCGTTCCCGATTTCATCATCGAGCGCGACGAGGAGAACGACGACTTCTTCGTGACGGTCAACGACTCGCGTCTTCCTACCCTGCGCGTCAGCGCAGCATACGAACGCCTGAAGAAGGAAGCGCGCTACAAGCAGTTCAACAAGGAAACGCGGGAATGGCTCAGAAAGAAGTATGAGGACGCGAAGTTCCTCATACAGGCCATCCGCCAGCGCAAAAGCACGATGTTGCGCGTGATGACGGCCATCGTCGGTCTGCAGAAGGATTTCTTCCGTCTCGGACCGCACGCCCTCAGACCGCTCATCTATCGTGACGTGGCCGAAGTGGCGGGCATGGACATCTCCACGATTTGCCGCATCGTGAACAGCAAGTACGTGCTCACGGAATTCGGCACGTTCGATCTCAAGTACTTCTTCAGCGAAAGCCTCACCACGGATGATGGAGAGGAAGTCTCGACGCGCATCATCAAGCAGAAGATCAAGGACCTGATCGATGCCGAGGCGAAGGGCAAGCCGCTGAGCGACGACAAGCTGGCGAAGGATCTCAAGAAGCTCGGTTACAACGTCGCACGGCGCACGGTTGCGAAGTACAGGGAACAGTTGCGCATACCCGTGGCGCGACTGCGCAGGGAGCTGTAG
PROTEIN sequence
Length: 540
MKLGMNLTASLQQTLTPQQIQYLKLLQLPTLQLEQHVRAEMENNPMLEEALADEAGERSPDSPSEPELDPGTAPMMSEPAPIIDSTNESTDQVSAEDYDPKDAFEFYKLIWGEDPSAGRSSDGRTGDEEDDGEGFQFRNETSFEEDLIEQLRFLPISIEERLLGEYIVGNVDTDGYLRRDLSEMVDEVNASIAEHNLALQAPALLGTMMSDMDSAIIDGVDHTLQPLSARQSESMLKRIQSLDPPGVASRTIQECLLAQLRAVPRPNAAQKLAIAVLATTYDAFAMKHYHVIERQLGVTEDYLREALEVIRKLNPKPGAGTFGPEMNTVVPDFIIERDEENDDFFVTVNDSRLPTLRVSAAYERLKKEARYKQFNKETREWLRKKYEDAKFLIQAIRQRKSTMLRVMTAIVGLQKDFFRLGPHALRPLIYRDVAEVAGMDISTICRIVNSKYVLTEFGTFDLKYFFSESLTTDDGEEVSTRIIKQKIKDLIDAEAKGKPLSDDKLAKDLKKLGYNVARRTVAKYREQLRIPVARLRREL*