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scnpilot_p_inoc_scaffold_37055_1

Organism: SCNpilot_P_inoc_Thiobacillus_core_68_1.2k_partial

partial RP 1 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: comp(3..569)

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 189.0
  • Bit_score: 357
  • Evalue 7.70e-96
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 189.0
  • Bit_score: 308
  • Evalue 7.60e-81
type I secretion outer membrane protein TolC similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 189.0
  • Bit_score: 285
  • Evalue 8.10e-75

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCAATTCAAACCCCTGTTTCTTGCCCTGACGCTGGCACTGGCACCCGCCGCCCACGCAGCGAATCTGTCCGACGTCTTCCGCGACGCGCAGGCCTACGACGCCCAATACGCCGCCGCCCGCGCCGCCTGGCAGGCCGGCCAGGAAAAGGCCGCGCAGGGCCGCGCCGGCCTGCTGCCCAACGTCAACCTGGGCGGCAACCTGCGCTACAACAATGTGGATTCCAGCCTCACCGGCGGCGACGCCGATTTCGCCTCCAACGGCCTGTCGGTCAACGCCGCGCAGCCGCTGTACCGCCGGCAGAACCAGGTGCTGTACGAACAGTCCAAGGGGCAGGTGAAAATCGCCGGAATGCAGTTCCAGGTGGCCGAACAGGATCTGATCCTGCGCGTCGCGCAGGCCTATTTCGACGTGCTGCAGTCGCAGGACAACATCGACTTCATCAATGCGCAAAAGGCCGCCATCACCGAACAGCTGGCCGCCGCCAAGCGCAACTTCGAAGTCGGCACCGCCACCATCACCGACACCCACGAAGCGCAGGCGCGCTACGACCTCGCGGTGGCGCAG
PROTEIN sequence
Length: 189
MQFKPLFLALTLALAPAAHAANLSDVFRDAQAYDAQYAAARAAWQAGQEKAAQGRAGLLPNVNLGGNLRYNNVDSSLTGGDADFASNGLSVNAAQPLYRRQNQVLYEQSKGQVKIAGMQFQVAEQDLILRVAQAYFDVLQSQDNIDFINAQKAAITEQLAAAKRNFEVGTATITDTHEAQARYDLAVAQ