ggKbase home page

scnpilot_p_inoc_scaffold_42023_2

Organism: SCNpilot_P_inoc_Thiobacillus_core_68_1.2k_partial

partial RP 1 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: comp(286..1572)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 428.0
  • Bit_score: 792
  • Evalue 3.90e-226
RNA-splicing ligase RtcB n=1 Tax=Thiobacillus thioparus RepID=UPI000361F847 similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 428.0
  • Bit_score: 790
  • Evalue 6.20e-226
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 428.0
  • Bit_score: 717
  • Evalue 1.90e-204

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
GTCGCCACCCTGCCGGGTATTGTCGATGCCGCCTACGCCATGCCCGACGCGCACTGGGGTTATGGCTTCCCGATCGGCGGCGTGGCGGCGTTCGATGCCGACGCGGGCGGGGTGGTTTCCGCCGGCGGGGTGGGCTTCGACATTTCCTGCGGCGTGCGCACTCTGCACACCGGATTGAAGGCCGTGGAGATCGCGCCGCTCAAGCAGCGGCTGGCCGATCGCCTGTTCGCCCGGATTCCGGCAGGGCTGGGCAGCACCGGCCAATTGCGCCTCGATGCCAGCGAGATGGACGCGATGCTGCGCGGCGGCGCACGCTGGGCGGTCGAGCGCGGCTACGGCAGCGAGGCCGACCTCGAGCGTATCGAGGAACGCGGCTGCATGGCCGGCGCTGAACCCGGCAACGTGTCCGAGCACGCCAAGCGCCGCCAGCGCGACGAAATCGGCACCCTCGGCTCCGGCAACCATTACCTCGAATTGCAGGAAATTGCCGAAATCTACGACAGCAAGGCGGCCGACCGTTTCCGCCTGCGCCGGGGCGAGGTGGTGGTCAGCATCCACTGCGGTTCGCGTGGGCTGGGACACCAGATCGGCACCGAGTTCCTCAGGCAGATGGTGATCGCCGCGCCGGGTCACGGCATCGAACTGCCCGACCGCGAGCTCGCCTGTGCGCCGATCCTTTCTCCCCTCGGTCAGGCCTACCTCGGCGCCATGCGCGCGGCGGTCAACTGCGCCCTGGCCAATCGCCAGGTCATCACCCAGCTTGCCCGCCAGGTGTTCGCCGACATCGTGCCGGGAACCCATCTCACCCTGATCTACGACGTATCGCACAACACCTGCAAGCTGGAGCCGCATACGGTCGAAGGCCAGACGCGACGCCTCTACGTGCACCGCAAGGGCGCGACGCGCGCCTTCGGCCCGGGCCACCCGGCGCTGCCGGGCGAATTGCGCGATATCGGCCAGCCGGTGCTGATCGGCGGCAGCATGGGCACCGCGTCCTACATCCTGGCCGGCACCGAAACCGGTTTGACGCGCGCCTTCAGTTCCGCCTGCCACGGTGCCGGGCGCGCCATGAGCCGCCACCAGGCCGCCCGTCAGTGGCACGGCCGGGCACTGGTGGACGAACTCGCCGGCCGGGGCATCCTGATCCGCAGTCCGTCGCTGCGCGGCGTGGCGGAAGAGGCTCCGGGCGCCTACAAGGACGTCAGCGCCGTGGTGGAGGCGGCCGCTCGCGCCGGGCTGGCGCGCAAGGTGGCGAAGCTGAAGCCGCTGGTGTGCATCAAGGGCTGA
PROTEIN sequence
Length: 429
VATLPGIVDAAYAMPDAHWGYGFPIGGVAAFDADAGGVVSAGGVGFDISCGVRTLHTGLKAVEIAPLKQRLADRLFARIPAGLGSTGQLRLDASEMDAMLRGGARWAVERGYGSEADLERIEERGCMAGAEPGNVSEHAKRRQRDEIGTLGSGNHYLELQEIAEIYDSKAADRFRLRRGEVVVSIHCGSRGLGHQIGTEFLRQMVIAAPGHGIELPDRELACAPILSPLGQAYLGAMRAAVNCALANRQVITQLARQVFADIVPGTHLTLIYDVSHNTCKLEPHTVEGQTRRLYVHRKGATRAFGPGHPALPGELRDIGQPVLIGGSMGTASYILAGTETGLTRAFSSACHGAGRAMSRHQAARQWHGRALVDELAGRGILIRSPSLRGVAEEAPGAYKDVSAVVEAAARAGLARKVAKLKPLVCIKG*