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scnpilot_p_inoc_scaffold_328_25

Organism: SCNpilot_P_inoc_Magnetospirillum_64_120

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(22139..22822)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2102449 bin=GWB2_Desulfobacterales_56_26 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 177.0
  • Bit_score: 136
  • Evalue 3.40e-29
Uncharacterized protein {ECO:0000313|EMBL:EKD39163.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 136
  • Evalue 4.70e-29
RNA polymerase sigma factor SigZ similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 195.0
  • Bit_score: 125
  • Evalue 1.70e-26

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 684
ATGCTCGCCGAAAAGCCGGCGCTGCTGGGAAAGACGCGGGCCACCGAAAAAGGACGCAGAGATATTTTTTGCGTCTTTTCGGGTTATCGACCGTCTAAGCTGGTCAATGCCCCAGGAAAGAATGCGAGCATGACCACCCTTGGCGACCTGTCCCGATTTTACCACGTTCTGCGGGCGTATGTGGGACGGCGTGTCGCCATGGCCGACGACGCCGACGAGATCGTCCAGACGGTGATGATGCGCCTGCACCTGAACCAGGACCGTTTGCACGACGCCAATGTGACGGCGTGGCTGCTGCGCGTGGCCCGTAACGCCGTCATCGACCATTACCGGTCGCGGGCCGGACGTCCGCCCACCACCGAACTGTCCGACGACCTGGCCCAACCCGTGGCCGACGATGACGACGGCGAACGCCAGCGCATGGCCCAATGCCTTCACCCGCTTCTGCAGGCCCTGCCCCCACATTATGCCCAAGCGGTCGAGATGGCCGATTTTCAGGGATTGCCGCATGCCCGGATGGCGGAAGAACTGGGGATCGGGCTGTCGGCGGTGAAATCACGGGTGCAACGGGGCCGCGCCTTGCTGCGGGCCGAACTGACCCGCTGCTGCAGTATCGAAATCGACCATCTGAGACGGGCAGTGGCGATGACGGCCAAGGAAAAAGACGGCTGCAGCCGATGCTAG
PROTEIN sequence
Length: 228
MLAEKPALLGKTRATEKGRRDIFCVFSGYRPSKLVNAPGKNASMTTLGDLSRFYHVLRAYVGRRVAMADDADEIVQTVMMRLHLNQDRLHDANVTAWLLRVARNAVIDHYRSRAGRPPTTELSDDLAQPVADDDDGERQRMAQCLHPLLQALPPHYAQAVEMADFQGLPHARMAEELGIGLSAVKSRVQRGRALLRAELTRCCSIEIDHLRRAVAMTAKEKDGCSRC*