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scnpilot_p_inoc_scaffold_1588_8

Organism: SCNpilot_P_inoc_Magnetospirillum_64_120

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(10617..14798)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2616
  • Evalue 0.0
rpoB; RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2616
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4D1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2616
  • Evalue 0.0
  • rbh

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4182
ATGGCTAAATCCTATACGGGTCGGAAGCGTGTTCGCAAAAGCTTCGGGCGCATCCCCACCGTGGCCCCGATGCCCAACCTGATCGAGGTGCAGAAAAGCTCCTATGATCATTTCCTGCAAATGGACACGTTGCCGGAAAAGCGGACCAATGTCGGCCTGCAGGAAGTCTTTAAGTCGGTTTTTCCGATCAAGGATTTCTCTGAGCGCGGCACTCTGGAATTCGTCAAGTACGAGCTGGAACAGCCCAAGTACGACGTCGAGGAATGCCAGCAGCGTGGCATGACCTTCGCCGCCCCCTTGAAGGTGACCCTGCGCCTGGTGGTGTGGGACATCGACGAGGACACCGGCGCGCGGTCCATCCGCGACATCAAGGAGCAGGACGTGTACATGGGCGACATGCCGCTCATGACCGCCAACGGCACCTTCGTCATCAACGGCACCGAACGCGTCATCGTTTCCCAGATGCACCGCAGCCCGGGCGTGTTCTTCGACCACGACAAGGGCAAGACCCATTCGTCGGGCAAGTACCTGTTCGCCGCCCGCGTCATCCCCTATCGCGGTTCCTGGCTGGACTTCGAGTTCGACGCCAAGGATCTGGTCTATGTCCGCATCGACCGTCGCCGCAAGCTGCCGGTGACCACCCTGCTGTACGCGCTGGACAGCGTCGCCACCCAGGCGTTGCGTGCCAGCCGCGCCGCCGAGGGCCGCCCGGTCGACCTGACCGAGCTGAAGGGCATGACCAGCGAGGACATCCTCGACTACTTCTACGACAAGAACGTCTACACCCGCGGCCCCAAGGGCTGGAAGACCGCGTTCCAGCCGGAACGCATGAAGGGTGTGAAGCTGGTCTATGACCTGATCGACGCCAAGACCGGCGAGAAGGTGGCCGAGGCCGGCGCCAAGATGACCCCGCGTCTGGGCAAGAAGCTGAAGGAACAGGGCGTCGAGGACATCCTGGTCCTGCCGGAAGATCTGACCGGTCAGTACGCCGCCGAGGACATCATCAACGAGAAGACCGGCGAGATTTACATCGAAGCCGGTCACGAGTTGACCGCCGCCGTGTTGGCCGAGCTGGAAAAGGCCGGTGTCACCGAGCTGCCGATGCTGGCCATCGACCACATCAATGTCGGTCCCTACATCCGCAACACGCTGTCGGTGGACAAGAACGCCAGCCGCGAAGAAGCGCTGATCGACATCTACCGCGTCATGCGTCCGGGCGAACCGCCGACCCTGGAAACCGCCGAAGCGCTGTTCCAGGGCCTGTTCTTCGATTCCGAACGCTACGACCTGTCGGCGGTCGGCCGCGTCAAGATGAACTCGCGCCTGAACTTCACCGAAAAGGATGTCCCCGACACCGTGCGCGTGCTGCGCAAGGAAGACATCCTGGCCGTCATCAAGATCCTGGTGGAACTGAAGGACGGCAAGGGCGAGATCGACGACATCGACCATCTGGGCAACCGTCGTGTCCGCTCGGTGGGCGAACTGATGGAAAACCAGTATCGCGTCGGCCTCTTGCGCATGGAACGCGCCATCCGCGAACGCATGTCGTCCGTCGATATCGATTCGGTGATGCCGCACGACCTGATCAACGCCAAGCCGGCTGCCGCCGCGGTGCGTGAGTTCTTCGGTTCGTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAATCACCCACAAGCGTCGTCTCTCGGCCCTCGGGCCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAAGTCCGCGACGTTCACCCCACCCATTACGGCCGTATCTGCCCGATTGAGACCCCCGAAGGTCCGAACATCGGTCTGATCAACAGCTTGGCCACCTATGCCCGCGTCAACCAGTACGGCTTCATCGAGGCTCCCTATCGTCGCGTCGTCGACGGCAAGGTGACCGACGACGTGCAGTACATGTCGGCGAACGAGGAAGGCCGCTACACCGTCGCCCAGGCCAATTCGGAACTGGACGCCGAAGGCCGCTTCGTCCACGACCTGGTGTCGTGCCGTCAGGCCGGCGAATTCGTCATGGTGCCGCCCAGCGAAATCACCATGATCGACGTGTCGCCCAAGCAGCTGGTGTCGGTCGCCGCGGCGCTGATCCCGTTCTTGGAAAACGACGACGCGAACCGCGCCCTGATGGGTTCGAACATGCAGCGTCAGGCGGTTCCGCTGATCCGCGCCGAGGCGCCCCTGGTGGGCACCGGCATGGAGCAGGCGGTGGCGCGTGACTCGGGCGCGGCGATCACCGCCAAGCGTACCGGCATCGTCGACCAGGTGGACGCCACTCGTATCGTTATCCGCGCCACCGAGGATGTTTCGTCCAACGAATCCGGCGTCGACATCTACAACCTGCTGAAGTTCCAGCGTTCCAACCAGAACACCTGCATCACCCAGAAGCCGCTGGTGACCGTGGGCGACATCATCCGCAAGGGTGACATCATCGCCGACGGCCCCAGCACCCAGCTGGGCGAGCTGGCCCTGGGCCGCAACGTGCTGGTCGCGTTCATGCCCTGGAACGGCTACAACTTCGAAGATTCGATCCTGATTTCGGAACGCATCGTCCGTGACGACGTCTTCACCTCGATCCACATCGAGGAATTCGAAGTCATGGCCCGCGACACCAAGCTGGGCCAGGAAGAAATCACCCGCGACATCCCCAACGTGGGCGAAGAAGCGCTGAAGAACCTGGACGAAGCCGGTATCGTTTATATCGGTGCCGAGGTGAAGCCGGGCGACATCCTGGTCGGCAAGGTGACGCCGAAGGGCGAAAGCCCGATGACCCCGGAAGAAAAGCTGCTGCGCGCCATCTTCGGCGAAAAGGCGTCCGACGTCCGCGACACCAGCTTGCGTCTGCCCCCGGGCGTCGCCGGCACCATCGTGGAGGTGCGTGTCTTCTCGCGTCGTGGCGTGGAAAAGGACGAACGCGCCCTGGCCATCGAACGGTCGGAAATCGAACGTCTGGCCAAGGACCGCGACGACGAACGCGCCATCTTGGAACGCTCCTTCGCCGCCCGTCTGAAGCAGCTGCTGCTGGGTCAGAAGGTGGTGTCCGGTCCCAAGGGCGTGAAGGCCAACGTGCCGCTCACCGAGGACATGCTGGCCGAACTGCACCTGTCGGCCTGGCGCAACATCGCCGTCGAAGACGACGCGGTGATGATGGATGTGGAAAGCCTGAAGCGGGCTTTCGACATGGCCGTCGAGCGTCTGCAGGACCGCTTCGAGAACAAGGTCGAAAAGCTGCAGCGCGGTGACGAGCTGCCGCCCGGCGTGATGAAGATGGTCAAGGTGTTCGTGGCGGTGAAGCGCAAGCTGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTGTCATCTCGCGCATCATGCCGCTGGAAGACATGCCTTACCTGGAAGACGGCCAGCAGGTCGACATCGTGCTGAACCCCCTGGGTGTGCCGTCGCGTATGAACGTCGGTCAGATCCTGGAAACCCATCTGGGTTGGGCCGCCGCCGGCCTGGGTCAGCAGATCGGCCGCGTCCTGGAAAGCGTCAAGCATTCCTCGGGCAGCGTCGCCGACGTGCGGGGCAAGCTGAAGGACATCTATGGTTCCGAGTATTACGACGAGGAAATCAGCGACCTGTCCGACGGCGAAATCCTGGAACTGGCCACCAACCTGAAGCCCGGCACGCCGTTTGCCACCCCGGTTTTCGACGGTGCCCGCGAAAGCGACATCTGCGAAATGCTGGAAAAGGCGGGGCGCGACCGTTCGGGTCAGGTCACCTTGTTCGACGGCCGTACCGGTGATCCCTTCGACCGCAAGGTCACCGTGGGCTACATCTACATGCTGAAGCTGCACCACCTGGTGGACGACAAGATCCACGCCCGTTCCATCGGCCCGTACTCGCTGGTCACCCAGCAGCCGTTGGGCGGTAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAAATGGAAGTGTGGGCGCTGGAAGCTTACGGCGCGGCCTATACGTTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGTCCGGCCGCACCAAGGTCTACGAAGCCATCGTCCGCGGCGACGACAACTTCGAGGCCGGCATCCCCGAATCCTTCAACGTGCTGGTCAAGGAACTGCGCTCGCTCGGCTTGAACGTCGAGCTGACCCAGCGCGATTTCTAA
PROTEIN sequence
Length: 1394
MAKSYTGRKRVRKSFGRIPTVAPMPNLIEVQKSSYDHFLQMDTLPEKRTNVGLQEVFKSVFPIKDFSERGTLEFVKYELEQPKYDVEECQQRGMTFAAPLKVTLRLVVWDIDEDTGARSIRDIKEQDVYMGDMPLMTANGTFVINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYLFAARVIPYRGSWLDFEFDAKDLVYVRIDRRRKLPVTTLLYALDSVATQALRASRAAEGRPVDLTELKGMTSEDILDYFYDKNVYTRGPKGWKTAFQPERMKGVKLVYDLIDAKTGEKVAEAGAKMTPRLGKKLKEQGVEDILVLPEDLTGQYAAEDIINEKTGEIYIEAGHELTAAVLAELEKAGVTELPMLAIDHINVGPYIRNTLSVDKNASREEALIDIYRVMRPGEPPTLETAEALFQGLFFDSERYDLSAVGRVKMNSRLNFTEKDVPDTVRVLRKEDILAVIKILVELKDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIRERMSSVDIDSVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNQYGFIEAPYRRVVDGKVTDDVQYMSANEEGRYTVAQANSELDAEGRFVHDLVSCRQAGEFVMVPPSEITMIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEAPLVGTGMEQAVARDSGAAITAKRTGIVDQVDATRIVIRATEDVSSNESGVDIYNLLKFQRSNQNTCITQKPLVTVGDIIRKGDIIADGPSTQLGELALGRNVLVAFMPWNGYNFEDSILISERIVRDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALKNLDEAGIVYIGAEVKPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFSRRGVEKDERALAIERSEIERLAKDRDDERAILERSFAARLKQLLLGQKVVSGPKGVKANVPLTEDMLAELHLSAWRNIAVEDDAVMMDVESLKRAFDMAVERLQDRFENKVEKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRIMPLEDMPYLEDGQQVDIVLNPLGVPSRMNVGQILETHLGWAAAGLGQQIGRVLESVKHSSGSVADVRGKLKDIYGSEYYDEEISDLSDGEILELATNLKPGTPFATPVFDGARESDICEMLEKAGRDRSGQVTLFDGRTGDPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVRGDDNFEAGIPESFNVLVKELRSLGLNVELTQRDF*