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scnpilot_p_inoc_scaffold_165

Search features with annotation key words

Displaying items 61-90 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_165_61
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68556..69206)
DNA (651bp) protein (217aa)
dihydroxyacetone kinase subunit DhaL; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
Dihydroxyacetone kinase, phosphoprotein-dependent, L subunit id=2864446 bin=GWF1_Rhodobacteraceae_65_7 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
scnpilot_p_inoc_scaffold_165_62
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69269..69904)
DNA (636bp) protein (212aa)
dihydroxyacetone kinase, L subunit; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
Dihydroxyacetone kinase, L subunit id=2864448 bin=GWF1_Rhodobacteraceae_65_7 species=Ochrobactrum sp. CDB2 genus=Ochrobactrum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
dihydroxyacetone kinase subunit DhaL
scnpilot_p_inoc_scaffold_165_63
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69912..70904)
DNA (993bp) protein (331aa)
glycerone kinase; K05878 dihydroxyacetone kinase, N-terminal domain [EC:2.7.1.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
Glycerone kinase (EC:2.7.1.29)
Glycerone kinase id=2864450 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_165_64
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70912..71670)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR id=2864452 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
smoS; short chain dehydrogenase Tax=GWF1_Rhodobacteraceae_65_7_curated
smoS; short chain dehydrogenase
scnpilot_p_inoc_scaffold_165_65
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71765..72748)
DNA (984bp) protein (328aa)
Periplasmic binding protein/LacI transcriptional regulator id=2864528 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
solute-binding component of ABC transporter; K10439 ribose transport system substrate-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
putative solute-binding component of ABC transporter
scnpilot_p_inoc_scaffold_165_66
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72823..73818)
DNA (996bp) protein (332aa)
Monosaccharide-transporting ATPase id=2864532 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
inner-membrane translocator; K10440 ribose transport system permease protein Tax=GWF1_Rhodobacteraceae_65_7_curated
inner-membrane translocator
scnpilot_p_inoc_scaffold_165_67
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73846..75324)
DNA (1479bp) protein (493aa)
sugar ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] Tax=GWF1_Rhodobacteraceae_65_7_curated
ABC transporter related protein id=2864537 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
sugar ABC transporter
scnpilot_p_inoc_scaffold_165_68
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75672..76676
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00037D66B2
Oxidoreductase {ECO:0000313|EMBL:KIC07707.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
yfmJ; NADP-dependent dehydrogenase
scnpilot_p_inoc_scaffold_165_69
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76765..77649
DNA (885bp) protein (295aa)
UPI0003CFCE98 related cluster n=1 Tax=unknown RepID=UPI0003CFCE98 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ08462.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
transcriptional regulator
scnpilot_p_inoc_scaffold_165_70
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77680..78585)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036A6F7C rbh
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EBA06796.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" sourc
Transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_165_71
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78893..80476
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003610A73 rbh
Putative extracellular solute-binding protein {ECO:0000313|EMBL:EBA06795.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source
Extracellular solute-binding protein family 5
scnpilot_p_inoc_scaffold_165_72
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80553..81527
DNA (975bp) protein (325aa)
ABC transporter permease n=1 Tax=Aureimonas ureilytica RepID=UPI00035FA25D rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB96557.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
Putative binding-protein-dependent transport permease
scnpilot_p_inoc_scaffold_165_73
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81527..82432
DNA (906bp) protein (302aa)
peptide ABC transporter permease n=1 Tax=Aureimonas ureilytica RepID=UPI0003718531 rbh
Putative transport system permease protein {ECO:0000313|EMBL:EBA06793.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="S
Binding-protein-dependent transporter inner membrane component family protein 68
scnpilot_p_inoc_scaffold_165_74
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82429..83412
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003716C10 rbh
Dipeptide transport ATP-binding (ABC superfamily)
Dipeptide transport ATP-binding (ABC superfamily) {ECO:0000313|EMBL:CDN57991.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
scnpilot_p_inoc_scaffold_165_75
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83409..84413
DNA (1005bp) protein (335aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Aureimonas ureilytica RepID=UPI000378A900 rbh
Dipeptide transport ATP-binding (ABC superfamily) rbh
Dipeptide transport ATP-binding (ABC superfamily) {ECO:0000313|EMBL:CDN57990.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
scnpilot_p_inoc_scaffold_165_76
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84439..85908
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037DBD5A rbh
Amidohydrolase {ECO:0000313|EMBL:EUB96562.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizo
Aminobenzoyl-glutamate utilization protein B
scnpilot_p_inoc_scaffold_165_77
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86142..86546
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI0003670AA8
Uncharacterized protein {ECO:0000313|EMBL:KGJ05837.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophil
hypothetical protein
scnpilot_p_inoc_scaffold_165_78
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86551..87285)
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Ketogulonicigenium vulgare RepID=E3F358_KETVY rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ05836.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus haloph
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_165_79
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87289..87921)
DNA (633bp) protein (211aa)
Transcriptional activator, putative n=2 Tax=Ketogulonicigenium vulgare RepID=E3F359_KETVY rbh
Transcriptional regulator {ECO:0000313|EMBL:KGJ05835.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus haloph
transcriptional activator rbh
scnpilot_p_inoc_scaffold_165_80
unknown

Not on your lists

87942..88328
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_165_81
unknown

Not on your lists

88380..88643
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_165_82
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88695..89972
DNA (1278bp) protein (426aa)
FAD dependent oxidoreductase n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F361_KETVY rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KGJ05833.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" sourc
FAD dependent oxidoreductase rbh
scnpilot_p_inoc_scaffold_165_83
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89969..90745
DNA (777bp) protein (259aa)
Putative cyclopropane/cyclopropene fatty acid synthesis protein n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F362_KETVY rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EXL01561.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" sourc
cyclopropane/cyclopropene fatty acid synthesis protein
scnpilot_p_inoc_scaffold_165_84
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90745..91914
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000377DAD4 rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EXL01562.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" sourc
cyclopropane-fatty-acyl-phospholipid synthase, putative
scnpilot_p_inoc_scaffold_165_85
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91940..92797)
DNA (858bp) protein (286aa)
Chelated iron transport system membrane protein YfeD n=1 Tax=Citreicella sp. SE45 RepID=D0D974_9RHOB rbh
Membrane protein {ECO:0000313|EMBL:KEO55129.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 101
ABC-3 metal transporter
scnpilot_p_inoc_scaffold_165_86
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92797..93651)
DNA (855bp) protein (285aa)
ABC-3 protein n=1 Tax=Citreicella sp. 357 RepID=I1AVC4_9RHOB rbh
Membrane protein {ECO:0000313|EMBL:KEO55128.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 101
ABC-3 protein rbh
scnpilot_p_inoc_scaffold_165_87
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93648..94499)
DNA (852bp) protein (284aa)
Manganese ABC transporter, ATP-binding protein SitB n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QKS7_9RHOB rbh
Manganese/iron transporter ATP-binding protein {ECO:0000313|EMBL:KEP71319.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" sour
sitB; Mn+2/Fe+2 ABC transporter ATPase SitB
scnpilot_p_inoc_scaffold_165_88
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94496..95395)
DNA (900bp) protein (300aa)
Periplasmic chelated iron-binding protein YfeA n=1 Tax=Citreicella sp. SE45 RepID=D0D971_9RHOB rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEO55126.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" sour
manganese/iron ABC transporter, substrate binding protein rbh
scnpilot_p_inoc_scaffold_165_89
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95512..95955
DNA (444bp) protein (148aa)
Ferric uptake regulation protein n=1 Tax=Citreicella sp. 357 RepID=I1AVC7_9RHOB
Fur family transcriptional regulator {ECO:0000313|EMBL:KEP71321.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thiocl
ferric uptake regulator family protein
scnpilot_p_inoc_scaffold_165_90
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96051..97562
DNA (1512bp) protein (504aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Histidine kinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B138_PARDP rbh
histidine kinase
Displaying items 61-90 of 163 in total

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