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scnpilot_p_inoc_scaffold_22_18

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 12403..13023

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000376A23F similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 209.0
  • Bit_score: 102
  • Evalue 3.80e-19
Transcriptional regulator {ECO:0000313|EMBL:EXG81571.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.; similarity UNIPROT
DB: UniProtKB
  • Identity: 31.7
  • Coverage: 202.0
  • Bit_score: 105
  • Evalue 8.10e-20
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 190.0
  • Bit_score: 100
  • Evalue 6.90e-19

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCGGAACAACCGGCGCGCCGGCGGCGTACCCAAAGCGAACGGCGCGAGGCGACGCAGGCCGCGGTCCTCGACACGGCGCTCGAAATCCTGGCGACCGAGGGCTACGTCGCCTTCGCCTCAAGCGGGGTCGCTGCGCGGGCCGGTATTTCGCGCGGGGCGCTTGAGCATTATTATCCCAAGAAGATCGACCTCATCGCCGCCGCCTGCCACCATGCCATTGAACGTTCCGTGGCCGAAGCGCGCGAAGCGGCCGCAAGCCCGGACATGGCGGGCGATCCGGTCGGCACCTTCCTTTCCGCTTCGGAACGCTTCTTCTTCGCCCCTGCCTATGCCGCCCAGATCGAGCTTCTCATCGCCGCCCGTGCCGACAGGGCGCTGGCCGGGGTGATCCACCCGATCGTCCTTGATGCGAGGCGGCGGCTCGACGATGTCTGGACCGAGGTCCTGATCCGCCTGGGTCAGGAGGCCGTCGTGGCCCGGCGCTATGTCGACCTGTCGCATGTGCTGATGCGCGGTCTCTATCTTGCCGAGACCTGGCTGCCCCAGGGAGACGAACGCGAAAAGATCATCGCACAATGGCGTGACGCCTCGCGCGCCTTGCTGGCGTCCGGGCTTTAA
PROTEIN sequence
Length: 207
MAEQPARRRRTQSERREATQAAVLDTALEILATEGYVAFASSGVAARAGISRGALEHYYPKKIDLIAAACHHAIERSVAEAREAAASPDMAGDPVGTFLSASERFFFAPAYAAQIELLIAARADRALAGVIHPIVLDARRRLDDVWTEVLIRLGQEAVVARRYVDLSHVLMRGLYLAETWLPQGDEREKIIAQWRDASRALLASGL*