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scnpilot_p_inoc_scaffold_77_3

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2104..2646)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJ89_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 179.0
  • Bit_score: 242
  • Evalue 4.50e-61
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 178.0
  • Bit_score: 260
  • Evalue 2.30e-66
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 172.0
  • Bit_score: 184
  • Evalue 3.20e-44

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGATGATCCGATAGCCGATCTGCTGACCCGATGCGCCGCGCAGGACCGCGCGGCGTTTCGGGAATTATACTCCGCCACCAGCGCGAAACTTATGGGCGTGCTCCTGCGTATGTTGAAAGACCGGCAGGAAGCGGAGGAAGCCTTGCAAGAGGTTTATACCCGGATCTGGCTGCGCGCGCAGCGTTTTGACCCCGCACGGGGACGCGGCATGACATGGGTCATTGCCGTCGCCCGGCATCTGGCCATCGACCGGCTGCGCGCCCGACCGATAGAGACCGAGGAAGCTGAATACGACCAGATCGCCGACAGCGCACCACGGGCCGAAAGCCGCCTGATCGCGCTGGGCGAGGCCCGGCAGATCGTCCAGTGCTTTGACACCCTGGAACCGGCCCGCGCCGCCGCGCTGCGCGGCGCCTATCTGGACGGGCTGAGTTATGCCGATCTGGCAGGCAGGCATGACGTGCCGCTGAACACCATGCGCACCTGGCTGCGGCGCGGGCTTGCCGCGCTCCGCGATTGCATGGAAGGTGTCCGGGCATGA
PROTEIN sequence
Length: 181
MDDPIADLLTRCAAQDRAAFRELYSATSAKLMGVLLRMLKDRQEAEEALQEVYTRIWLRAQRFDPARGRGMTWVIAVARHLAIDRLRARPIETEEAEYDQIADSAPRAESRLIALGEARQIVQCFDTLEPARAAALRGAYLDGLSYADLAGRHDVPLNTMRTWLRRGLAALRDCMEGVRA*