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scnpilot_p_inoc_scaffold_77_24

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 25827..26399

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphap similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 178.0
  • Bit_score: 297
  • Evalue 1.30e-77
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 182.0
  • Bit_score: 248
  • Evalue 1.10e-63
Shikimate kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKW6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 178.0
  • Bit_score: 297
  • Evalue 9.60e-78

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Taxonomy

Rhodobacter sp. CACIA14H1 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAAGGAAAAAAGGGCGAAGGGGATGGACCGACTGAAGAAGACCGTCGCGCTTGTCGGGATGATGGGTGCGGGCAAGACGGCGGTGGGTACCGCCGTGGCGCGGCTTCTGGGGGTTCCGTTCCGTGATTCCGACGAAGAAATCGTGCAGGCCGCGCAGCGCAGCATCGCCGAAATCTTTGAACGCGACGGCGAGCCGTTCTTCCGCGCCCGCGAGACCGAGGTACTGGGCCGCCTGCTGCGTGGAACGCCCTGTATCCTGTCGACCGGCGGTGGTGCCTTTCTGGCCGAACAGAATCGCGCACTGATCGGCGGGGCAGGGGTTTCGGTCTGGCTTCGGGCCGATCTGGATCTGCTCTGGCAACGCGTGCGGCACAAGACGACCCGGCCGCTGCTGCGCACCGCCAACCCGCGCGAGACGCTGCGCAACCTCTATGAGGCGCGGGTGCAGCTCTATGCGATGGCGGATCTGGTGGTGGATGCGGCGCCCGAACTTTCAATCGACGATATGGCACAGCGCGTGGTTGCCGCCCTTGCGACGCGACCCGATGTGCTGGAAAGGACTGACGCATGA
PROTEIN sequence
Length: 191
MKEKRAKGMDRLKKTVALVGMMGAGKTAVGTAVARLLGVPFRDSDEEIVQAAQRSIAEIFERDGEPFFRARETEVLGRLLRGTPCILSTGGGAFLAEQNRALIGGAGVSVWLRADLDLLWQRVRHKTTRPLLRTANPRETLRNLYEARVQLYAMADLVVDAAPELSIDDMAQRVVAALATRPDVLERTDA*