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scnpilot_p_inoc_scaffold_165_12

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(13287..13949)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 203.0
  • Bit_score: 208
  • Evalue 1.50e-51
Transcriptional regulator, TetR family id=2469127 bin=GWF1_Rhodobacteraceae_65_7 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 218.0
  • Bit_score: 208
  • Evalue 6.80e-51
TetR family transcriptional regulator {ECO:0000313|EMBL:AHK02766.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 203.0
  • Bit_score: 208
  • Evalue 7.30e-51

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGACACCGCCCGAGGAAAGCCAGAAGCTCAGCGCACATGAGGAAAAGACCCAGACCACGCGCACGCGCATTCTGGAGGCGGCCCGGCAGCAGTTTGTGGAACGCGGGCTGGAAGGTGCGCGGATCGAGCTGGTGGCGAAGCGGGCAGGGGTCAACAAGGCTTTGATCTACCGCCATTTCACCGACAAGGACCGGCTGTTTCAGGCGGTTCTGGAAGGCTGTTACCATCAGATCCGCGCGGCAGAGCGCGCGCTGGACCTGCCTGCCGACCCGCTTGCGGCGCTGGACAAGATCTGCGGTTTCACGCTGGATTATTACCGCCGTCATCCCGACCTTCTCGTGCTGGTCGGGATCGAGAACCTGCATGGCGGTGAGCATATCCGGCACGCCGACCGCGCCGGGATCGGGGCCGAGGATCTGCTGGCGCGCATGGCGGCGATCGTGCAGCGCGGCGAACAGGCAGGCCTGTTCCGGCCGGGGCTCGACCCGGCAGAGCTGTGGCAGCTGCTGTCGGCCCTGTGCTGGGTGACGGTGGCGAATGCCCATACATCGGGCTTCACTTTCGGGGTGGACATGCTGCACCCCGACCGGATCGGGGTGCGGCTGGACAACATCCGCCAGATGGTGCGCCGCTTTGTTGCCGCTCAGGCCGCAGCGGGCTGA
PROTEIN sequence
Length: 221
MTPPEESQKLSAHEEKTQTTRTRILEAARQQFVERGLEGARIELVAKRAGVNKALIYRHFTDKDRLFQAVLEGCYHQIRAAERALDLPADPLAALDKICGFTLDYYRRHPDLLVLVGIENLHGGEHIRHADRAGIGAEDLLARMAAIVQRGEQAGLFRPGLDPAELWQLLSALCWVTVANAHTSGFTFGVDMLHPDRIGVRLDNIRQMVRRFVAAQAAAG*