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scnpilot_p_inoc_scaffold_165_33

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 36268..36927

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J682_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 219.0
  • Bit_score: 386
  • Evalue 1.40e-104
  • rbh
Response regulator {ECO:0000313|EMBL:KGM87850.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DS similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 218.0
  • Bit_score: 388
  • Evalue 5.10e-105
Two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 219.0
  • Bit_score: 386
  • Evalue 3.90e-105

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Taxonomy

Roseovarius mucosus → Roseovarius → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGGCTGCTGCTGATCGAGGATGACACGGTTCTGGGCGCGGCGGTGCGCGACCAGATCGCGGCGGATGGCCAGTCGGTTGACTGGGTGACGCGGCTTGACGCGGCGGGTGATGCCCTGCGCGGCACGGCCTATGATCTGGTTCTGCTTGACCTCATGTTGCCCGATGGGCGCGGGATCGTCTTTCTGCGCGCGATGCGGGCGCGGGGCGATGTGACGCCGGTCATCATTCTCACTGCGCTTGATCAGGTGTCAGACCGGATCGAGGGGCTGAATGCCGGGGCCGACGACTATCTGGTGAAACCTTTCGACCTTGCCGAGCTTTCGGCGCGGATCGGATCTGTGGCGCGGCGCTATTCCGGCAATCCCAACCCGATCATCAGCCATGGCGCGCTGGAGATCGACCTTGCCGCGCGAAGTGTGCTGCGGGATGGCAAGACCGTCGCGCTGACCGCCCGCGAATGGGCACTGTTCGAGGCCCTGCTGGCCCGCCCCGGTCAGCTTCTGTCCAAGGCGCAGCTGGAAGAAAAGCTGTATGCCTTCGATGCCGAGATCGAAAGCAACACGATCGAGGTTCATGTCAGCCGCCTGCGCAAGAAGCTGGGCGCCACGGTGATTGAGACCGAGCGCGGCATGGGTTACCGGCTGGGCAAGCCATGA
PROTEIN sequence
Length: 220
MRLLLIEDDTVLGAAVRDQIAADGQSVDWVTRLDAAGDALRGTAYDLVLLDLMLPDGRGIVFLRAMRARGDVTPVIILTALDQVSDRIEGLNAGADDYLVKPFDLAELSARIGSVARRYSGNPNPIISHGALEIDLAARSVLRDGKTVALTAREWALFEALLARPGQLLSKAQLEEKLYAFDAEIESNTIEVHVSRLRKKLGATVIETERGMGYRLGKP*