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scnpilot_p_inoc_scaffold_266_13

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 10133..10354

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID57_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 50.0
  • Bit_score: 88
  • Evalue 2.60e-15
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KGJ05223.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus h similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 50.0
  • Bit_score: 93
  • Evalue 1.10e-16
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 50.0
  • Bit_score: 91
  • Evalue 1.50e-16

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Taxonomy

Paracoccus halophilus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGATCCGTCATGCCATGCGCATCCGCCGCCACGTCGCCACGGCCGCGGCCTTCACCTATGTCAGCCTCTTCATGGCTCCGGCCGCCCATGCCTCGGGATCGTCGATGCCATGGGAAGCACCGCTGCAATCCATCGCCGACGTGTTCGATGAGTTGTTCGGCTCGGTCGATTTGCCCGATGACTTGAAAATATTATCTTGTGATGATAAGGATAGGCCATGA
PROTEIN sequence
Length: 74
MIRHAMRIRRHVATAAAFTYVSLFMAPAAHASGSSMPWEAPLQSIADVFDELFGSVDLPDDLKILSCDDKDRP*