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scnpilot_p_inoc_scaffold_241_54

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(53560..54273)

Top 3 Functional Annotations

Value Algorithm Source
rph; ribonuclease PH (EC:2.7.7.56) similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 237.0
  • Bit_score: 410
  • Evalue 3.60e-112
Ribonuclease PH {ECO:0000255|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000255|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000255|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 237.0
  • Bit_score: 410
  • Evalue 1.80e-111
Ribonuclease PH n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=RNPH_RHOS5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 237.0
  • Bit_score: 410
  • Evalue 1.30e-111
  • rbh

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGGCCTTCCGGAAGAAAACTCGATCAACTTCGTGCAGTCAGCATCGAGGCCAATGTCTCGTTGCATGCTGAAGGGTCTTGCCTCATCCGCATGGGGAATACCCATGTCATCTGTACCGCGACAATCGAAGACAAGACTCCGCCCTTCCTGAAGAATACCGGGCTGGGTTGGGTGACGGCTGAATACGGCATGCTTCCCCGCGCCACTACCAGCCGCACTCGTCGGGAGGCTGCGGCCGGCAAGCAAGGCGGGCGAACGCAGGAGATTCAGCGCCTGATTGGCCGCTCGCTACGCGCGGGGATTGATCGCTCGGCGCTTGGCGAACGGCAGATTGTGGTGGACTGCGATGTGATCCAGGCCGATGGCGGCACACGTTGTGCCTCTATCACCGGCGGCTGGGTCGCCTTGCGCCTTGCGGTAAACAAGCTTCTTAAGGCCGGCCTTCTGACAAGCGATCCGATCATGGACAACGTCGCCGCCGTTTCCTGCGGGATCTACGCAGGCCAACCCGTGCTCGACCTGGATTACCCCGAGGACTCCGCCGCAGGCACCGATGGCAACTTCGTTTTGACGGGATCGCAACGATTGATCGAAGTTCAGATGTCAGCGGAAGGCGCGACCTTCTCACGGGAGCAGATGGCACAGTTGCTTGACCTTGCAGAGAGGGGCATTGCCGATCTTGTCGCGATCCAGAACTCGGCCATCGCATAA
PROTEIN sequence
Length: 238
MRPSGRKLDQLRAVSIEANVSLHAEGSCLIRMGNTHVICTATIEDKTPPFLKNTGLGWVTAEYGMLPRATTSRTRREAAAGKQGGRTQEIQRLIGRSLRAGIDRSALGERQIVVDCDVIQADGGTRCASITGGWVALRLAVNKLLKAGLLTSDPIMDNVAAVSCGIYAGQPVLDLDYPEDSAAGTDGNFVLTGSQRLIEVQMSAEGATFSREQMAQLLDLAERGIADLVAIQNSAIA*