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scnpilot_p_inoc_scaffold_241_84

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 88867..90087

Top 3 Functional Annotations

Value Algorithm Source
TrmA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 404.0
  • Bit_score: 640
  • Evalue 1.40e-180
(Uracil-5)-methyltransferase id=2937883 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 404.0
  • Bit_score: 660
  • Evalue 1.20e-186
  • rbh
RNA SAM-dependent methyltransferase similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 405.0
  • Bit_score: 581
  • Evalue 2.00e-163

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAAACTGACCATCGCGCGGCTTGGGCACCATGGCGACGGCATCGCCGAGGGGCCGGAAGGTCCGGTCTATGTGCCGGGCATGTTGCCGGGCGAGGAAGTGGAGGGGGAGCTTCAGGGCAGCCAGTTGACCGCGCCGAAGATCGTGACGCCCTCGGCGGACCGGGTGAAGCCGCCCTGCGCCCATGCAAAAAGCTGTGGCGGCTGTCTGATGCAGCATGCGCGTGACGGTTTCGTGGCTGACTGGAAGCTGGGCATCGTGCGCGGCGCGCTGGCGGGGCAGGGGTTGGAGGCACCGTTGCGGCCGATCCTGACCTCGCCACCACGCTCGCGCCGTCGAGCCACGCTGGCCGGGCGGCGCACCAAGGGCGGGGCGCTGATCGGCTTTCACGCGCGCGGGTCAGATACCATTATCCCCGTGCCGAACTGCCAGCTTCTGCACCCCGATCTGATGGGCGCGGTGCCCGCGCTGGAGGCGCTGGTGCGCACAGGCGGCTCCCGCACGGGCGAGCTTGCGCTGACGGTGACGCGCAGCCTTGCCGGGCCGGATGTGGCGGTACAGGGCGGCAAGCCTCTGGATGCGACGCTGCGGCTGGATCTGGCCCGCGTGGCCGAGGCGCATGGCCTGTCGCGGCTCAGCTGGGGCGATGAGGTGATCGCCCTTCGTGCTGCGCCGATGCAACGCATGGGCCGCGCGCTGGTCGCCCCGCCGCCCGGTGCCTTTCTGCAAGCGACCGAAGAAGGGGAGGCGGCGCTGCTGTCCGCAGTGACCGAAGCCGTGGGCGATGCGCCGCGCATCGTCGATCTGTTCGCGGGCTGCGGCACCTTCACCCTGCCGCTGGCCGAACGTGCCGATGTGCTGGCCGCTGAAGGCGACGCCGCGATGATGGCGGCGCTGGACAAGGGCTGGCGTCAGGCCGGGGGCCTGCACCGCGTCACCTGTGAAACGCGCGACCTGTTCCGGCGCCCGCTGGAGCCTGACGAGTTCAAGGGCGTGGGCGCCGTCGTCATCGACCCGCCGCGCGCCGGGGCCGAGGCGCAGGTGGCGACGCTTGCGCACAGCCGGGTGCCGGTCATCGCCATGGTCTCATGCAATCCGATCACCTTTGCCCGTGATGCAAAGGTGCTGGTTGCGGCGGGGTGGCGGCTCGATTGGGTACAGGTGGTCGACCAGTTCCGCTGGGCGGCGCATGTGGAACTGGCTGCCCGCTTCAGCTTGTGA
PROTEIN sequence
Length: 407
MKLTIARLGHHGDGIAEGPEGPVYVPGMLPGEEVEGELQGSQLTAPKIVTPSADRVKPPCAHAKSCGGCLMQHARDGFVADWKLGIVRGALAGQGLEAPLRPILTSPPRSRRRATLAGRRTKGGALIGFHARGSDTIIPVPNCQLLHPDLMGAVPALEALVRTGGSRTGELALTVTRSLAGPDVAVQGGKPLDATLRLDLARVAEAHGLSRLSWGDEVIALRAAPMQRMGRALVAPPPGAFLQATEEGEAALLSAVTEAVGDAPRIVDLFAGCGTFTLPLAERADVLAAEGDAAMMAALDKGWRQAGGLHRVTCETRDLFRRPLEPDEFKGVGAVVIDPPRAGAEAQVATLAHSRVPVIAMVSCNPITFARDAKVLVAAGWRLDWVQVVDQFRWAAHVELAARFSL*