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scnpilot_p_inoc_scaffold_314_7

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(6056..6631)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein / SSU ribosomal protein S30P id=2518597 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 192.0
  • Bit_score: 336
  • Evalue 1.40e-89
  • rbh
sigma 54 modulation protein/ribosomal protein S30EA Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 191.0
  • Bit_score: 336
  • Evalue 2.00e-89
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 191.0
  • Bit_score: 323
  • Evalue 4.60e-86

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCGTTACCAGATCAGTGGAAAACAGATTGATATCGGTGAGGCGCTTCAGACCCATGTGAAGGCCGAACTGGGCGAGGTGGTGGAAAAATACGCCCAGCGCCCGACCGACGCTGTGATTGTGTTTTCCAAGGCCGCGCACGAATTCGTATGCGAGGCCACGATCCACCTTTCCACCGGGCTGAATGCCAGTGCGAAAGGCAGCGCATCCGAAGTCTATGCCGCGTTCGAGGCCTGCCGCGAGAAGATGGACAAGCAATTGCGCCGTCACAAACGCCGCCTGCGCGACCACCACCACAAGCGCACGGCCCCTGTTGAATTCGACGGCGGTTCCTCCTATATCCTCGCCCCGACCGATGAGGGCGACGAGAGCGAGGCAATCTCTGATCAGCCCATCGTCATCGCCGAGATGGAGACGAAGATTCCTTCGATCACCGTCGGCGAGGCGGTGATGCAGTTGGAGCTGGCCGGGCAGAAGATGCTCGTCTTCCGCAATGAAGGACATGGCGGGGTGAACGTCGTATATCGCCGGGATGACGGCAATATCGGCTGGATCGACCCGCGCAACAGCAAATAG
PROTEIN sequence
Length: 192
MRYQISGKQIDIGEALQTHVKAELGEVVEKYAQRPTDAVIVFSKAAHEFVCEATIHLSTGLNASAKGSASEVYAAFEACREKMDKQLRRHKRRLRDHHHKRTAPVEFDGGSSYILAPTDEGDESEAISDQPIVIAEMETKIPSITVGEAVMQLELAGQKMLVFRNEGHGGVNVVYRRDDGNIGWIDPRNSK*