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scnpilot_p_inoc_scaffold_772_30

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 30029..30316

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 id=2617425 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 96.0
  • Bit_score: 171
  • Evalue 5.20e-40
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 95.0
  • Bit_score: 171
  • Evalue 7.30e-40
rpmB; LSU ribosomal protein L28P similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 167
  • Evalue 2.10e-39

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGTCGCGCGTCTGCGAACTGAGCGGTAAAGGCCCGATGGTTGGTAACAACATCAGCCACGCCAACAACAAGACCAAACGGCGCTTCCTGCCGAACCTGAATGACGTCACCCTGATCTCGGACGTTCTGGGCCAGTCGTTCAAGCTGCGCGTGTCCTCGGCCGCGCTGCGGACCGTCGATCACCGTGGCGGCCTGGATGCTTTCCTCGCGAAAGCCAAGGATGACGAGCTTTCGGCCAAGGCGCTGAAGATCAAGAAAGAGATCGAGAAGGCTCAGGCTGCCGCCTGA
PROTEIN sequence
Length: 96
MSRVCELSGKGPMVGNNISHANNKTKRRFLPNLNDVTLISDVLGQSFKLRVSSAALRTVDHRGGLDAFLAKAKDDELSAKALKIKKEIEKAQAAA*