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scnpilot_p_inoc_scaffold_821_20

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(18200..19435)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z2I7_PARAH similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 413.0
  • Bit_score: 407
  • Evalue 1.90e-110
site-specific recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 411.0
  • Bit_score: 780
  • Evalue 8.70e-223
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 413.0
  • Bit_score: 407
  • Evalue 5.20e-111

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Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGCGACCAGGCAAACGCAAATTCATGTTGAAGGACGACCCGGGCAATTTGCTTGCCCCGGTGTTTGGAGCCTATCGGCAACGCTTGAGCGACGGGAAGTATGCGCCCAAGGTGCAAGCGCTGTACTTCGCAACCGTTTTCCATTTCGGCGACTGGCTCAAAACCGAAGGCGTTGCCCTTGGACAGGTCCGGGATCGGCACATCCGACAGTTTCTCGCCGATCACATGCCGTCTTGCGAGTGTTATCGCCATACGCGCGGCGACAAACACACAAATCGCGCAGCCCTGAATCTGCTCGGGCGGGTCATGGAGGGCACTGGGTTCGCTATGACGCGGACCCTGACGCCAATGGATGCGGAGCTTTCGCGCTTCGACGCGAAGATGCGAGAGGTGTGGGGCTATTCCGAGAGCACACGGGCAGCACGGTGCCGCATCGTCAAGCGTTTCCTGACTTCTACAGAAGGAGGGCATGATATTGATTTAGATAAGCTTTCCAAGTCCGACGTATCACGTTTCATCACCGGTGACGGCAACCGGGGAGCAAGTTGCGCACGCGGATTGTCTGGCGCGATCCGCTGCTTCCTGCGGTATCGCCAGTTGATCGGCGATGACGTCACACCTTTGCTTGCAGGTTTGCCGCGCCCCCCGCGACCCAAGCCTTCCACCTTGCCAGACGTTCTCAAGGACGTCGAAGTCGACGCGCTGCTGCAGTCGTTCAGTGCTGACTTTCCTCAGTGCCGGCGCGCGTTCGCAATCGCCAGATGCCTGATCGATCTTGGTATGCGCTCTTCCGAGGTGGCCGGACTGACCCTTGAAGACATCGACTGGCAGCGCGGTACGATCCGGGTCACCCATCGCAAAGGACGCCGTGCAGATATTCTGCCGCTGCTGGAAGCGACTGGTAAGGCGATCGCAGACTACATCCTGCATGAGCGCCCTGCGCCCGCTTGCCTCAACATTTTCGTCCGACACAGGCCACCTATCGGTGAACCGATAGGACGACGCGCCGTTCAGACGACCATGCTGGCCGCCTACCGTCGTCTGGGCTGGGATCGCACCCGGGTTCATATTCTCCGCCACACCCTGGCAACACGGCTTCTGGCGAGGGGTACACCAATGCCCGTTATAGCGGACGTCATGGGCCATCGCAGCCTCGATACGACAGTGATTTATACCAAGCTGGACAGCGCATGGTTGTCCAAGGTGTCACTGGCATGGCCGGGAGGCGCACAATGA
PROTEIN sequence
Length: 412
MRPGKRKFMLKDDPGNLLAPVFGAYRQRLSDGKYAPKVQALYFATVFHFGDWLKTEGVALGQVRDRHIRQFLADHMPSCECYRHTRGDKHTNRAALNLLGRVMEGTGFAMTRTLTPMDAELSRFDAKMREVWGYSESTRAARCRIVKRFLTSTEGGHDIDLDKLSKSDVSRFITGDGNRGASCARGLSGAIRCFLRYRQLIGDDVTPLLAGLPRPPRPKPSTLPDVLKDVEVDALLQSFSADFPQCRRAFAIARCLIDLGMRSSEVAGLTLEDIDWQRGTIRVTHRKGRRADILPLLEATGKAIADYILHERPAPACLNIFVRHRPPIGEPIGRRAVQTTMLAAYRRLGWDRTRVHILRHTLATRLLARGTPMPVIADVMGHRSLDTTVIYTKLDSAWLSKVSLAWPGGAQ*