ggKbase home page

scnpilot_p_inoc_scaffold_1355_13

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 7464..7979

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10 id=3043622 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 172.0
  • Bit_score: 293
  • Evalue 1.20e-76
rplJ; 50S ribosomal protein L10 Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 171.0
  • Bit_score: 293
  • Evalue 2.30e-76
rplJ; LSU ribosomal protein L10P similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 171.0
  • Bit_score: 289
  • Evalue 5.10e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGGATAGAGCCCAGAAAGAGAAAGTGGTCGAGGAACTCGGCCAGATCTTCGAAAGCTCTGGCGTGGTTGTGGTTGCACACTACGCGGGTATCACGGTTGCAGAGATGCAGGACCTGCGGGCGCAAATGCGCGCCGTCGGCGGTTCCGTTCGCGTTGCCAAGAACAAGCTCGCCAAGATCGCCCTTGAAGGGAAACCCGCTGCGAAGATGGGTGACCTGCTCACGGGCATGACCGTGATGTCCTTCTCGGAAGACCCCGTCGCTGCGGCGAAGGTCTGCGAGGCTTACGCCAAGAAGAACGACAAGTTCGTGATTCTGGGCGGTGCCATGGGCGACACGGTTCTGGACCAGGCCGGTGTGAAAGCCGTGGCCGCCCTGCCGTCGCGCGAAGAGCTCATTGCTCAGATCGTGTCGATGATCGGTGCGCCCGCGTCCAGCATCGCCGGGGCCATTGGCGCGCCTGCTTCGAACATCGCTGGCATCCTTTCGACCATCGAGGACAAGGCTGCGGCCTGA
PROTEIN sequence
Length: 172
VDRAQKEKVVEELGQIFESSGVVVVAHYAGITVAEMQDLRAQMRAVGGSVRVAKNKLAKIALEGKPAAKMGDLLTGMTVMSFSEDPVAAAKVCEAYAKKNDKFVILGGAMGDTVLDQAGVKAVAALPSREELIAQIVSMIGAPASSIAGAIGAPASNIAGILSTIEDKAAA*