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scnpilot_p_inoc_scaffold_2511_2

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 238..1509

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CUI5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 409.0
  • Bit_score: 327
  • Evalue 1.90e-86
  • rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EEW59262.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Si similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 409.0
  • Bit_score: 327
  • Evalue 2.70e-86
regulatory lipoprotein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 422.0
  • Bit_score: 318
  • Evalue 3.30e-84

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Taxonomy

Silicibacter sp. TrichCH4B → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGGGCAGACCTGTCCGTCAACCGGCGCGGCATCTTGCGGCCGCGCTGACAGCCTGTGTCTGGGCGCTGATCGTGGTGGCGGCCCCGGCGCGGGCCGAGGTGCTGCGAATCCTGACCTCGATGCCCCCGGCAATGACCGACCCCTACGTCGCCCGGATGAAGGCCAGGGCACCGGGACTGGATGTTCTGGTACTGAACAAGAACACCGTTTCGGCGGTCGAGGAACTGCTGCGCGGCAATGATCGGGCCTTCGACGTGTTCTGGGCTTCCGCCCCCGAGGCGTTTGAACTTCTGGCAAGGCAGGGGCGGTTTGCCGCAGACAGCGGCTGCACCGGCATCCCGACAGAGGGATACGGCCCTTTCGCCCTGTCCTCCATCGGCTGGACCCTGCGCCGCGATGGCCCGAACCCGCCGCAGGACTGGGATGACCTGCTGAACCCGGTCTGGCGCGGCCAGATTGGCATGGCGCCGCCCTCACGCTCCGGTACGGCTCATATGACGGTGGAGCGGTTCTTGCAGGTGCGGGGCTGGAATGATGGCTGGGGCTTCTTTCTGGCCCTGACCGAAAACCTTGCCACCGTCACCTCGCGCAGCTTCGGCGTGACCGATGGCATCCGCAGCGGGCGCTTCGGCATCGGGTTGACCATCGACTTTCTGGCGGGCACCGCCGAGCCGGAACTGCAGTTTCACTACGGCACGCCCGCCATCCTGTTTCCGGCACAGATCGGCCTTCTGGCCGGGGCCGGAAACCCCGGCGCCGGTTGTGCCTTTATCGCCAGCGTCACCGATGACGATGGCCAGCGCCTGCTGCTGGAGCCCGGGATCGGCCGCATCCCGATCTCGCCCCGTGTACGCGAGGCGGCGGGCGATCTGATCCCGTCGGAAATCCGCGCCGCCGTCAGATCACAGTGGCTGCGCTACAATGCCGGGCTGGCGTCGGAACGCTATTGGGCGGTGAATGTGATCTTTGATCTGGCAATCACCGAACGGCTGGACCGGCGCCGAAGCTTGTGGTCAAGGCTGCATGCGCTGGAGGCGCGCGGACCCAGGGCCGAAACCGCCGCGATCCGTCGGATGATGCAGTCAATCCCGATTTCGGAACATGAGGTTCGCATGGCCGAAGGCACCAGCTTTGCCAACCGGGTGATGGAACTGACCGACCTGCCGACACCGCAACGCACCCTGCTGCGCGACTGGGAAAACCGGATCGAACGCCAGCTCGCGACAATCGACATCGCCCTGTCCGGGCTGGAAAAGCGGGTCAGGCCATGA
PROTEIN sequence
Length: 424
MGRPVRQPARHLAAALTACVWALIVVAAPARAEVLRILTSMPPAMTDPYVARMKARAPGLDVLVLNKNTVSAVEELLRGNDRAFDVFWASAPEAFELLARQGRFAADSGCTGIPTEGYGPFALSSIGWTLRRDGPNPPQDWDDLLNPVWRGQIGMAPPSRSGTAHMTVERFLQVRGWNDGWGFFLALTENLATVTSRSFGVTDGIRSGRFGIGLTIDFLAGTAEPELQFHYGTPAILFPAQIGLLAGAGNPGAGCAFIASVTDDDGQRLLLEPGIGRIPISPRVREAAGDLIPSEIRAAVRSQWLRYNAGLASERYWAVNVIFDLAITERLDRRRSLWSRLHALEARGPRAETAAIRRMMQSIPISEHEVRMAEGTSFANRVMELTDLPTPQRTLLRDWENRIERQLATIDIALSGLEKRVRP*