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scnpilot_p_inoc_scaffold_12

Search features with annotation key words

Displaying items 391-420 of 466 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_12_391
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

484021..486432
DNA (2412bp) protein (804aa)
GGDEF domain protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VYT6_9BURK rbh
diguanylate cyclase with PAS/PAC sensor Tax=RBG_16_Gallionellales_56_9_curated
sensory box protein
scnpilot_p_inoc_scaffold_12_392
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

486648..487337
DNA (690bp) protein (230aa)
2,3-diketo-5-methylthio-1-phosphopentane phosphatase n=1 Tax=mine drainage metagenome RepID=T1A642_9ZZZZ
Phosphatase {ECO:0000313|EMBL:GAN45759.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis
phosphoserine phosphatase
scnpilot_p_inoc_scaffold_12_393
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

487346..488713
DNA (1368bp) protein (456aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE34 rbh
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:AJC48078.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthom
scnpilot_p_inoc_scaffold_12_394
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

488722..490482
DNA (1761bp) protein (587aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Sensor histidine kinase n=1 Tax=Pseudomonas fluorescens EGD-AQ6 RepID=U1TDD3_PSEFL
sensor histidine kinase
scnpilot_p_inoc_scaffold_12_395
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

490479..491876
DNA (1398bp) protein (466aa)
Fis-type n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3T8_AZOC5
Fis-type protein
Fis-type {ECO:0000313|EMBL:BAF87651.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain AT
scnpilot_p_inoc_scaffold_12_396
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491886..493109)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXX5_9GAMM
Beta-ACP synthase {ECO:0000313|EMBL:KGI77749.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
3-oxoacyl-(acyl-carrier-protein) synthase
scnpilot_p_inoc_scaffold_12_397
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(493106..493375)
DNA (270bp) protein (90aa)
Phosphopantetheine-binding protein n=1 Tax=mine drainage metagenome RepID=T1B8H2_9ZZZZ
Phosphopantetheine-binding protein {ECO:0000313|EMBL:GAN45756.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mi
phosphopantetheine-binding protein
scnpilot_p_inoc_scaffold_12_398
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(493414..494289)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036AE4C2
Alpha/beta hydrolase {ECO:0000313|EMBL:GAN45751.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter
esterase/lipase
scnpilot_p_inoc_scaffold_12_399
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(494655..495554)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000311B81C
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AIF47371.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_12_400
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(495551..496279)
DNA (729bp) protein (243aa)
ABC transporter n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000378816E rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGI77758.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Ole
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_12_401

Not on your lists

comp(496279..497406)
DNA (1128bp) protein (376aa)
Membrane protein containing DUF214, permase predicted (Fragment) n=2 Tax=mine drainage metagenome RepID=T1AG29_9ZZZZ
Membrane protein containing DUF214, permase predicted {ECO:0000313|EMBL:EQD59461.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine
membrane protein spanning subunit
scnpilot_p_inoc_scaffold_12_402
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(497403..498833)
DNA (1431bp) protein (477aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WL02_9GAMM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88255.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_p_inoc_scaffold_12_403
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

499118..500230
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q6R1_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX48119.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (str
scnpilot_p_inoc_scaffold_12_404
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

500205..501059
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003677B2C
Uncharacterized protein {ECO:0000313|EMBL:KGI77752.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
protein
scnpilot_p_inoc_scaffold_12_405
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(501049..502254)
DNA (1206bp) protein (402aa)
nucleotide sugar aminotransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE2F
nucleotide sugar aminotransferase
Nucleotide sugar aminotransferase {ECO:0000313|EMBL:AJC48073.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomon
scnpilot_p_inoc_scaffold_12_406
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502247..502639)
DNA (393bp) protein (131aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WR34_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIM01926.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
cation/cationic drug transporter
scnpilot_p_inoc_scaffold_12_407
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502636..502995)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2JHJ3_9PSED
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:ENA33448.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H
scnpilot_p_inoc_scaffold_12_408
unknown

Not on your lists

503337..503879
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_409
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(503913..504305)
DNA (393bp) protein (131aa)
Transcriptional regulator, HxlR family n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YRM6_BURA4
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACB64300.1}; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
scnpilot_p_inoc_scaffold_12_410
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

504402..505154
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036031A6
NADP oxidoreductase coenzyme F420-dependent
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:CDN51430.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; N
scnpilot_p_inoc_scaffold_12_411
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

505444..506103
DNA (660bp) protein (220aa)
Glutathione S-transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y722_SORCE
Putative glutathione S-transferase-like protein {ECO:0000313|EMBL:KIH85361.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
glutathione S-transferase
scnpilot_p_inoc_scaffold_12_412
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

506318..507466
DNA (1149bp) protein (383aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=116
Carboxylate-amine ligase UUA_02201 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSI4_9GAMM rbh
glutamate--cysteine ligase
scnpilot_p_inoc_scaffold_12_413
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(507580..507969)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9R4_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58785.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
hypothetical protein
scnpilot_p_inoc_scaffold_12_414
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

508328..508822
DNA (495bp) protein (165aa)
Prophage PssSM-02, Orf10 n=1 Tax=Pseudomonas syringae pv. syringae SM RepID=S3MIJ3_PSESY
Prophage PssSM-02, Orf10 {ECO:0000313|EMBL:EPF66258.1}; TaxID=1262350 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_12_415
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(508946..510232)
DNA (1287bp) protein (429aa)
FAD dependent oxidoreductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7U5_9GAMM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIL95536.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
FAD-dependent oxidoreductase
scnpilot_p_inoc_scaffold_12_416
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(510229..511194)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6YL25_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAC24721.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
scnpilot_p_inoc_scaffold_12_417

Not on your lists

comp(511222..512406)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036963C0
Cystathionine gamma-synthase {ECO:0000313|EMBL:EQD58245.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cystathionine gamma-synthase
scnpilot_p_inoc_scaffold_12_418
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512431..513300)
DNA (870bp) protein (290aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1379159
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7U4_9GAMM rbh
UTP--glucose-1-phosphate uridylyltransferase
scnpilot_p_inoc_scaffold_12_419
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(513458..515347)
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B13AC rbh
Multidrug MFS transporter {ECO:0000313|EMBL:KJV33147.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeoj
multidrug MFS transporter
scnpilot_p_inoc_scaffold_12_420
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(515340..516392)
DNA (1053bp) protein (351aa)
Glycosyl transferase, group 4 family protein n=1 Tax=mine drainage metagenome RepID=T1ARW0_9ZZZZ
glycosyl transferase family 4
Glycosyl transferase family 4 {ECO:0000313|EMBL:AHX12895.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangning
Displaying items 391-420 of 466 in total

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