ggKbase home page

scnpilot_p_inoc_scaffold_26

Search features with annotation key words

Displaying items 121-150 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_26_121
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143686..144759)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A1V8_9NEIS rbh
Uncharacterized protein {ECO:0000313|EMBL:ERE10605.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulben
hypothetical protein
scnpilot_p_inoc_scaffold_26_122
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144756..146702)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZM23_9NEIS rbh
Uncharacterized protein {ECO:0000313|EMBL:ERE10606.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulben
hypothetical protein
scnpilot_p_inoc_scaffold_26_123
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146751..147779)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A0A0_9NEIS rbh
Uncharacterized protein {ECO:0000313|EMBL:ERE10607.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulben
hypothetical protein
scnpilot_p_inoc_scaffold_26_124
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147766..148497)
DNA (732bp) protein (244aa)
Putative membrane protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D7N7_MYXXD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABF89552.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoc
scnpilot_p_inoc_scaffold_26_125
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(148494..150551)
DNA (2058bp) protein (686aa)
TonB-dependent receptor plug domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYR5_9GAMM
outer membrane cobalamin receptor protein-like protein Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_26_126
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151421..151882
DNA (462bp) protein (154aa)
TmRNA n=2 Tax=Stenotrophomonas RepID=B8L1X9_9GAMM
Phage-related integrase {ECO:0000313|EMBL:CCP16100.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
phage-related integrase
scnpilot_p_inoc_scaffold_26_127
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151882..152583
DNA (702bp) protein (234aa)
Integrase n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB2388 RepID=K8FU06_9XANT
Integrase
Phage-related integrase {ECO:0000313|EMBL:CEM58828.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestri
scnpilot_p_inoc_scaffold_26_128
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152625..153158
DNA (534bp) protein (178aa)
MarR family transcriptional regulator n=2 Tax=Pseudomonas stutzeri TS44 RepID=I4JGF9_PSEST
MarR family transcriptional regulator Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_26_129
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153198..153737
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase id=2556326 bin=GWF1_Rhodobacteraceae_65_7 species=Pseudomonas syringae genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJV08399.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litora
GCN5 family acetyltransferase
scnpilot_p_inoc_scaffold_26_130
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153746..155191
DNA (1446bp) protein (482aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUS3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL35483.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
monooxygenase
scnpilot_p_inoc_scaffold_26_131
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155188..156381
DNA (1194bp) protein (398aa)
Major facilitator superfamily MFS_1 id=2556324 bin=GWF1_Rhodobacteraceae_65_7 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL35484.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
major facilitator transporter
scnpilot_p_inoc_scaffold_26_132
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157054..158292)
DNA (1239bp) protein (413aa)
MFS transporter permease n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UGR3_PSEME
MFS transporter permease {ECO:0000313|EMBL:KGM55909.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenic
major facilitator superfamily transporter
scnpilot_p_inoc_scaffold_26_133
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158298..159305)
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JGA8_PSEST
glyceraldehyde-3-phosphate dehydrogenase
scnpilot_p_inoc_scaffold_26_134
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159334..159837)
DNA (504bp) protein (168aa)
Protein tyrosine phosphatase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJD3_STRM5
Uncharacterized protein {ECO:0000313|EMBL:KGM55911.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_26_135
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159869..160942)
DNA (1074bp) protein (358aa)
Arsenite efflux pump ACR3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6D6_9GAMM
Arsenite efflux pump ACR3 {ECO:0000313|EMBL:EIL95027.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
arsenical-resistance protein
scnpilot_p_inoc_scaffold_26_136
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160939..161457)
DNA (519bp) protein (173aa)
Putative arsenate reductase ArsC n=1 Tax=Rhodanobacter sp. 115 RepID=I4W3X4_9GAMM
Putative arsenate reductase ArsC {ECO:0000313|EMBL:EIL94165.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
protein-tyrosine-phosphatase
scnpilot_p_inoc_scaffold_26_137
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161465..161821)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037272CE
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGM55676.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_26_138
unknown

Not on your lists

comp(162093..162410)
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_26_139
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

162606..162884
DNA (279bp) protein (93aa)
DNA-binding protein HU n=1 Tax=Desmospora sp. 8437 RepID=F5SGV0_9BACL
DNA-binding protein HU {ECO:0000313|EMBL:EGK10672.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
histone family protein DNA-binding protein
scnpilot_p_inoc_scaffold_26_140
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163149..164396)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X6K7_VARPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48203.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
scnpilot_p_inoc_scaffold_26_141
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164735..166456
DNA (1722bp) protein (574aa)
von Willebrand factor type A domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Z2_PELHB rbh
von Willebrand factor A
von Willebrand factor type A domain protein {ECO:0000313|EMBL:AEQ51107.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" sour
scnpilot_p_inoc_scaffold_26_142
unknown

Not on your lists

comp(166911..167177)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_26_143
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(167391..168830)
DNA (1440bp) protein (480aa)
Cna B domain protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UHL3_9CYAN
Cna B domain protein {ECO:0000313|EMBL:EGK87700.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
polymorphic outer membrane protein
scnpilot_p_inoc_scaffold_26_144
unknown

Not on your lists

comp(168968..170488)
DNA (1521bp) protein (507aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_26_145
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170559..171122)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN51368.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
scnpilot_p_inoc_scaffold_26_146
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171450..173918
DNA (2469bp) protein (823aa)
serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C0A2_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49483.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
scnpilot_p_inoc_scaffold_26_147
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173848..174420)
DNA (573bp) protein (191aa)
ECF sigma factor family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C0A3_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KFN49482.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
ECF sigma factor family protein
scnpilot_p_inoc_scaffold_26_148
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175172..176404)
DNA (1233bp) protein (411aa)
Putative membrane protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3K0_FRAAD rbh
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_26_149
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176414..176767)
DNA (354bp) protein (118aa)
5-hydroxyisourate hydrolase n=2 Tax=Burkholderia thailandensis RepID=Q2SWV3_BURTA
transthyretin family protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_26_150
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176891..177937)
DNA (1047bp) protein (349aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
adenosine deaminase (EC:3.5.4.2)
adenosine deaminase n=1 Tax=Curvibacter lanceolatus RepID=UPI000364E38E
Displaying items 121-150 of 360 in total

View Taxonomy