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scnpilot_p_inoc_scaffold_26

Search features with annotation key words

Displaying items 211-240 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_26_211
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256145..257002)
DNA (858bp) protein (286aa)
Bifunctional protein FolD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX41_9GAMM rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
methenyltetrahydrofolate cyclohydrolase
scnpilot_p_inoc_scaffold_26_212
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257185..257478
DNA (294bp) protein (98aa)
cell division protein DedD n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D57A33
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27252.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
scnpilot_p_inoc_scaffold_26_213
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257669..258946)
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=GWF1_Xanthomonadales_69_6_curated
Serine--tRNA ligase id=2543335 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
scnpilot_p_inoc_scaffold_26_214
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259028..260224)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003760664 rbh
MFS transporter {ECO:0000313|EMBL:GAO36242.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
major facilitator superfamily MFS_1
scnpilot_p_inoc_scaffold_26_215
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260221..261585)
DNA (1365bp) protein (455aa)
Recombination factor protein RarA n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0M1_9GAMM
Recombination factor protein RarA {ECO:0000313|EMBL:EIL93012.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
recombination factor protein RarA
scnpilot_p_inoc_scaffold_26_216
unknown

Not on your lists

261700..262278
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_26_217
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(262275..262955)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E4C022
Membrane protein {ECO:0000313|EMBL:KGI77433.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
membrane protein
scnpilot_p_inoc_scaffold_26_218

Not on your lists

comp(262955..263638)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379ABA4
Marine sediment metagenome DNA, contig: S03H2_L01291 {ECO:0000313|EMBL:GAH46909.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cell envelope biogenesis protein LolA
scnpilot_p_inoc_scaffold_26_219
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263771..266092)
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368D2F5 rbh
DNA segregation ATPase FtsK {ECO:0000313|EMBL:EIL95272.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
cell division protein FtsK
scnpilot_p_inoc_scaffold_26_220

Not on your lists

comp(266372..267439)
DNA (1068bp) protein (356aa)
Alanine dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1A9Q9_9ZZZZ rbh
Alanine dehydrogenase {ECO:0000313|EMBL:EQD37629.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alanine dehydrogenase
scnpilot_p_inoc_scaffold_26_221
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267717..268676
DNA (960bp) protein (320aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
thioredoxin reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DDB62
thioredoxin-disulfide reductase
scnpilot_p_inoc_scaffold_26_222
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

268696..269841
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370DD6E
DUF482 multi-domain protein {ECO:0000313|EMBL:KGQ19047.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dok
hypothetical protein
scnpilot_p_inoc_scaffold_26_223
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

269838..270569
DNA (732bp) protein (244aa)
leucyl/phenylalanyl-tRNA/protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F6D9D rbh
scnpilot_p_inoc_scaffold_26_224
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270797..271015
DNA (219bp) protein (73aa)
translation initiation factor IF-1 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5B20C
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Are
translation initiation factor IF-1
scnpilot_p_inoc_scaffold_26_225
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(271601..273877)
DNA (2277bp) protein (759aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003690EBB rbh
ATP-dependent Clp protease subunit {ECO:0000313|EMBL:EIL98000.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
clpA; Clp protease ClpX
scnpilot_p_inoc_scaffold_26_226
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273919..274245)
DNA (327bp) protein (109aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSU5_PSEUU
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthom
scnpilot_p_inoc_scaffold_26_227
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274357..274860
DNA (504bp) protein (168aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8C01
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EIL98002.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
ADP-ribose pyrophosphatase
scnpilot_p_inoc_scaffold_26_228
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274857..275966
DNA (1110bp) protein (370aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DC329 rbh
scnpilot_p_inoc_scaffold_26_229
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

275971..276594
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E436F
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrim
uncharacterized protein involved in purine metabolism
scnpilot_p_inoc_scaffold_26_230
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

276849..279545
DNA (2697bp) protein (899aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1384054 species="Bacteria; Proteobacteria; Gam
acnA; aconitate hydratase (EC:4.2.1.3)
aconitate hydratase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EE9E2 rbh
scnpilot_p_inoc_scaffold_26_231
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279631..280179)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILB3_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82440.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
scnpilot_p_inoc_scaffold_26_232
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

280234..280647
DNA (414bp) protein (138aa)
HxlR family transcriptional regulator n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XUQ5_9PSEU
HxlR family transcriptional regulator {ECO:0000313|EMBL:EME52960.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis deca
HxlR family transcriptional regulator
scnpilot_p_inoc_scaffold_26_233
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(280667..281161)
DNA (495bp) protein (165aa)
RES domain protein id=3858663 bin=GWC2_Elusimicrobia_64_44 species=Gloeocapsa sp. PCC 73106 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
RES domain-containing protein
RES domain protein {ECO:0000313|EMBL:ADB39705.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / D
scnpilot_p_inoc_scaffold_26_234
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(281158..281604)
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_16_Elusimicrobia_66_12_curated
hypothetical protein VspiD_26445 id=3858668 bin=GWC2_Elusimicrobia_64_44 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
putative toxin-antitoxin system antitoxin component, TIGR02293 family
scnpilot_p_inoc_scaffold_26_235
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281707..282138)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNK5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88796.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_p_inoc_scaffold_26_236
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282301..283983
DNA (1683bp) protein (561aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGM54087.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KGM54087.1};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
long-chain fatty acid--CoA ligase (EC:6.2.1.3)
Putative long-chain fatty acyl CoA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEW9_9GAMM rbh
scnpilot_p_inoc_scaffold_26_237
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284116..284463)
DNA (348bp) protein (116aa)
pilus biosynthesis protein PilZ n=1 Tax=Dyella ginsengisoli RepID=UPI00036C10A6
Uncharacterized protein {ECO:0000313|EMBL:EIL98011.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
pilus assembly protein PilZ
scnpilot_p_inoc_scaffold_26_238
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284580..285761)
DNA (1182bp) protein (394aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1379159 species="Bacteria; Proteobacteria; Ga
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003130532 rbh
DNA polymerase IV
scnpilot_p_inoc_scaffold_26_239
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285815..286432
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7PV61_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EMR14324.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lo
hypothetical protein
scnpilot_p_inoc_scaffold_26_240
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286509..287417
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NF72_9GAMM rbh
hypothetical protein
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
Displaying items 211-240 of 360 in total

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