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scnpilot_p_inoc_scaffold_27

Search features with annotation key words

Displaying items 511-540 of 570 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_27_511
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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627039..628451
DNA (1413bp) protein (471aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NAY8_9GAMM
Amidase {ECO:0000313|EMBL:GAN45651.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
amidase
scnpilot_p_inoc_scaffold_27_512

Not on your lists

628525..629733
DNA (1209bp) protein (403aa)
CoA-transferase n=1 Tax=uncultured organism RepID=M1NRC2_9ZZZZ
CoA-transferase {ECO:0000313|EMBL:AGF87244.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_p_inoc_scaffold_27_513
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

629730..630341
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362605A
DNA methylase {ECO:0000313|EMBL:GAN45650.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
2OG-Fe(II) oxygenase
scnpilot_p_inoc_scaffold_27_514

Not on your lists

comp(630486..631364)
DNA (879bp) protein (293aa)
Membrane protein containing DUF6, transmembrane n=1 Tax=mine drainage metagenome RepID=T1CKW7_9ZZZZ rbh
Membrane protein containing DUF6, transmembrane {ECO:0000313|EMBL:EQD69040.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_27_515
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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631422..632660
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003462CBB
Uncharacterized protein {ECO:0000313|EMBL:EIL90131.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_27_516
unknown

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633059..633922
DNA (864bp) protein (288aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_27_517
unknown

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634011..635555
DNA (1545bp) protein (515aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_27_518
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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635660..637366
DNA (1707bp) protein (569aa)
proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase n=1 Tax=Dyella japonica RepID=UPI00030FCED6 rbh
scnpilot_p_inoc_scaffold_27_519
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(637507..637833)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH46340.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
scnpilot_p_inoc_scaffold_27_520
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(637843..638283)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF49240.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_27_521
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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638528..639328
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D6649 rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AIF49239.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" s
scnpilot_p_inoc_scaffold_27_522
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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639325..641019
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CD268
Serine phosphatase RsbU {ECO:0000313|EMBL:CCG41100.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
conserved protein of unknown function, containing Protein phosphatase 2C-like domain and ATPase-like, ATP-binding domain
scnpilot_p_inoc_scaffold_27_523
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

641016..641342
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F3AF4
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bac
anti-anti-sigma regulatory factor
scnpilot_p_inoc_scaffold_27_524
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

641339..642139
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003828279
Uncharacterized protein {ECO:0000313|EMBL:KHF25850.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
ABC-type transport system
scnpilot_p_inoc_scaffold_27_525
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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642136..642942
DNA (807bp) protein (269aa)
ABC transporter (EC:3.6.3.25)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036826E3
ABC-type transport system; K02065 putative ABC transport system ATP-binding protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
scnpilot_p_inoc_scaffold_27_526
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

642965..643891
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371CE8E
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_27_527
unknown

Not on your lists

643888..644493
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B4826
scnpilot_p_inoc_scaffold_27_528
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

644490..644969
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F8762
Uncharacterized protein {ECO:0000313|EMBL:EIL99646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_27_529
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

644954..645436
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EEB79
Uncharacterized protein {ECO:0000313|EMBL:KFN43622.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
ribosomal-protein-alanine acetyltransferase
scnpilot_p_inoc_scaffold_27_530
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(645443..645736)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003083F33
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX11905.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_27_531
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

645802..646146
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036D2485
Ferredoxin {ECO:0000313|EMBL:GAN45350.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.
ferredoxin
scnpilot_p_inoc_scaffold_27_532
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646396..648243)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BFA38 rbh
Potassium transporter TrkA {ECO:0000313|EMBL:GAN45349.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiib
di-/tricarboxylate transporter
scnpilot_p_inoc_scaffold_27_533
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648268..648972)
DNA (705bp) protein (235aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX7_9GAMM
tRNA (guanine-N(7)-)-methyltransferase
scnpilot_p_inoc_scaffold_27_534
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648972..649763)
DNA (792bp) protein (264aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
Thiazole synthase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UEZ7_XANAP
ThiG; thiazole biosynthesis protein
scnpilot_p_inoc_scaffold_27_535

Not on your lists

comp(650001..650306)
DNA (306bp) protein (102aa)
ThiS, thiamine-biosynthesis n=1 Tax=mine drainage metagenome RepID=T0YJI2_9ZZZZ
ThiS, thiamine-biosynthesis {ECO:0000313|EMBL:EQD33318.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
thiamine biosynthesis protein ThiS
scnpilot_p_inoc_scaffold_27_536
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(650303..652693)
DNA (2391bp) protein (797aa)
Putative prolin-rich exported protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUX4_9RHOO rbh
putative prolin-rich exported protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_27_537
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

653091..654674
DNA (1584bp) protein (528aa)
Phage-related integrase n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BVC9_XANC5
phage-related integrase
Phage-related integrase {ECO:0000313|EMBL:CAJ23185.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
scnpilot_p_inoc_scaffold_27_538
unknown

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comp(655442..655786)
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_27_539
unknown

Not on your lists

comp(655783..656307)
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_27_540
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(656653..658197)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=J7DAL4_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB69796.1}; TaxID=1249470 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" sourc
hypothetical protein
Displaying items 511-540 of 570 in total

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