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scnpilot_p_inoc_scaffold_290

Search features with annotation key words

Displaying items 31-60 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_290_31
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33175..34071
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D98A
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF47069.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;
scnpilot_p_inoc_scaffold_290_32
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34128..34469
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=2 Tax=Shewanella baltica RepID=G0AWP7_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG11093.1}; TaxID=693974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella b
scnpilot_p_inoc_scaffold_290_33
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34536..36929)
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003651DAB rbh
penicillin-binding protein
Penicillin-binding protein {ECO:0000313|EMBL:AIF47862.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.
scnpilot_p_inoc_scaffold_290_34
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36950..42970)
DNA (6021bp) protein (2007aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003612E58 rbh
alpha-2-macroglobulin
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_290_35
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43282..43929)
DNA (648bp) protein (216aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA2; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
methionine sulfoxide reductase A n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F7C8D5
scnpilot_p_inoc_scaffold_290_36
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44097..45020)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E04A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95494.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_290_37
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45017..45673)
DNA (657bp) protein (219aa)
glutathione transferase (EC:2.5.1.18)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379FE0A
Uncharacterized protein {ECO:0000313|EMBL:KFN50523.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
scnpilot_p_inoc_scaffold_290_38
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(45889..46206)
DNA (318bp) protein (106aa)
hypothetical protein id=24603408 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
scnpilot_p_inoc_scaffold_290_39

Not on your lists

comp(46382..47857)
DNA (1476bp) protein (492aa)
L-aspartate oxidase n=3 Tax=mine drainage metagenome RepID=T0Z1U0_9ZZZZ rbh
L-aspartate oxidase {ECO:0000313|EMBL:EQD38187.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aspartate oxidase
scnpilot_p_inoc_scaffold_290_40
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47957..48319)
DNA (363bp) protein (121aa)
ADP-ribosylation/crystallin J1 n=1 Tax=Salinispora arenicola RepID=UPI000374B205
Uncharacterized protein {ECO:0000313|EMBL:KGM40423.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_290_41
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48316..49350)
DNA (1035bp) protein (345aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella
Quinolinate synthase A n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IB0_RHOP5
quinolinate synthetase
scnpilot_p_inoc_scaffold_290_42
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49556..49813)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000310943E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJV30738.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
scnpilot_p_inoc_scaffold_290_43

Not on your lists

49907..50428
DNA (522bp) protein (174aa)
Putative DinB family protein n=1 Tax=mine drainage metagenome RepID=E6PU07_9ZZZZ
Putative DinB family protein {ECO:0000313|EMBL:CBH98414.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_290_44
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50514..50822
DNA (309bp) protein (103aa)
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B3714E
hypothetical protein
S-adenosylmethionine tRNA ribosyltransferase {ECO:0000313|EMBL:EYT48289.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium
scnpilot_p_inoc_scaffold_290_45
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50901..52637
DNA (1737bp) protein (579aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glutaminyl-tRNA synthetase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B57AE3
glutaminyl-tRNA synthetase
scnpilot_p_inoc_scaffold_290_46
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52733..53293
DNA (561bp) protein (187aa)
nucleoside deaminase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C3693
Nucleoside deaminase {ECO:0000313|EMBL:KGM56664.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenicires
nucleoside deaminase
scnpilot_p_inoc_scaffold_290_47
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53383..54465
DNA (1083bp) protein (361aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551};; 23S rRNA (cytidine2498-2'-O)-methyltr
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361EB7F
RNA 2'-O-ribose methyltransferase
scnpilot_p_inoc_scaffold_290_48
unknown

Not on your lists

54607..54747
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_290_49
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54751..55041
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI0002D9A374
Uncharacterized protein {ECO:0000313|EMBL:AHY59715.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
scnpilot_p_inoc_scaffold_290_50
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55055..56737)
DNA (1683bp) protein (561aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC (EC:3.6.3.44)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC {ECO:0000313|EMBL:AJY49494.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AJY49494.1};; Flags: Precursor;; TaxID=1504981
ATP-binding/permease protein CydC n=1 Tax=Halomonas boliviensis LC1 RepID=G9EF27_9GAMM rbh
scnpilot_p_inoc_scaffold_290_51
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56734..58377)
DNA (1644bp) protein (548aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD (EC:3.6.3.44)
ATP-binding/permease protein CydD n=1 Tax=Halomonas boliviensis LC1 RepID=G9EF28_9GAMM rbh
ATP-binding/permease protein CydD {ECO:0000313|EMBL:CEP34670.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas
scnpilot_p_inoc_scaffold_290_52
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58418..58531)
DNA (114bp) protein (38aa)
Cyd operon protein YbgT n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VVF6_MARMS
cyd operon protein YbgT
Cyd operon protein YbgT {ECO:0000313|EMBL:ABR70435.1}; Flags: Precursor;; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp.
scnpilot_p_inoc_scaffold_290_53
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58542..59696)
DNA (1155bp) protein (385aa)
cydB; CydB (EC:1.10.3.-)
Cytochrome d oxidase cyd, subunit II n=1 Tax=Beggiatoa alba B18LD RepID=I3CKS0_9GAMM
Cytochrome d oxidase cyd, subunit II {ECO:0000313|EMBL:EIJ44213.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa a
scnpilot_p_inoc_scaffold_290_54
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59707..61290)
DNA (1584bp) protein (528aa)
Cytochrome d ubiquinol oxidase subunit I {ECO:0000313|EMBL:KEA62853.1}; EC=1.10.3.- {ECO:0000313|EMBL:KEA62853.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JJH9_9GAMM
cytochrome d terminal oxidase subunit 1
scnpilot_p_inoc_scaffold_290_55
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61641..62459
DNA (819bp) protein (273aa)
Universal stress protein UspA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG43_9GAMM
Universal stress protein UspA {ECO:0000313|EMBL:EIL98434.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
universal stress protein UspA-like protein
scnpilot_p_inoc_scaffold_290_56
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62496..63881
DNA (1386bp) protein (462aa)
Metallo-beta-lactamase family protein, RNA-specific n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DUK8_STEMA rbh
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
mRNA 3'-end processing factor
scnpilot_p_inoc_scaffold_290_57
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63959..64537
DNA (579bp) protein (193aa)
Cyclic nucleotide-binding protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TCZ2_9GAMM
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EIT71543.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hy
hypothetical protein
scnpilot_p_inoc_scaffold_290_58
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64598..65629)
DNA (1032bp) protein (344aa)
alcohol dehydrogenase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003818E8F
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:KEZ18382.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoiku
scnpilot_p_inoc_scaffold_290_59
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65741..66367)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C1F4E
universal stress protein
Universal stress protein {ECO:0000313|EMBL:AHX13330.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
scnpilot_p_inoc_scaffold_290_60
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66378..66797)
DNA (420bp) protein (140aa)
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malt
Universal stress protein UspA-like protein id=2521404 bin=GWF1_Xanthomonadales_69_6 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
UspA domain-containing protein
Displaying items 31-60 of 111 in total

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