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scnpilot_p_inoc_scaffold_12_4

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 3590..4861

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XIF3_9ALTE similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 427.0
  • Bit_score: 341
  • Evalue 1.30e-90
HlyD family secretion protein {ECO:0000313|EMBL:GAC20429.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaci similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 427.0
  • Bit_score: 341
  • Evalue 1.80e-90
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 429.0
  • Bit_score: 337
  • Evalue 4.00e-90

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Taxonomy

Paraglaciecola arctica → Paraglaciecola → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGATCCGTGATACCAGTCAAAGCGACATCATCGTCGCGCGCGAATCCCGCTTCGGCCGCAAGAAACTGCTGCTGGCGGCCGTCGCTGCCGGAACCCTGCTGCTGGGCGTGTCGGCCTATTCGGCGGTCTCGCCGTGGCTCAGCGCCGAGCGCACGGTCTCGGCCGACCGCCTGCGCATCATGCCGGTCGTGCGCGGCAACTTCGAACGCAGCATCTCGGTGCAGGGCACCGTGGATGCGGCGATACGTCCGACCGTCTACAGCCTGTCCGAAGGCGTGGTCACCTTGCACGTGAAGGCCGGCGACACGGTCGAGAAGGGCCAGCTGATCGCCGAGATCGACAACCCCGAAGCACGCAGCGCGCTCAAGCAGGAAGAGGCGCGGCTGCAGCAGGTCAGCACCGACCTCGCGCGGCTGCGCATCACCAGCGACCAGCAGAAGCTGGCCAATGCGCAGGAGCTCGCGCTGCAGCGCATCGAGCTCGACGCGGCCGAGCGGCGCGTGCGCCGCACCGGCGAGGCCCTGGCCAAGAATGTGATCTCGCGCCAGGACCACGAAGAGGCCGAGGACACGCTGGCCACGGCGCAGACGCGCCTGAAACACAACAGCGAGCGCGTGCGGCTGGAGAGCGACCGCCTCAACTTCGAGGTCAAGAGCAAGGCGCTGGAGGTCGAACAGCAGGAACTGGCGCTGGCCGAAGTGCGCCGTCGCGTCGAGGAGCTGCGCATCCTGAGTCCGACCGCCGGCGTGGTCGGCAATATCGCCGTGCAGGAGCGCGACAAGGTCGCCCTGAACCAGGCGCTGATGACGGTGGTGGATCTGAGCGCCTACGAGGTGCTCGTGACGATTCCGGAAAGCTATTCCGACGATCTCGCGCCGCCGCTGAAGGCTTCGATCAACGTGCAGGGCCGTGTCTTTACCGGCAGCCTGACCTCGATCTCGCCCGAAGTGCGCGACGGCCACGTCGAAGGCCGCATCGCGCTGGACGACAGCAGCGGCGCCGGTCTCAAGCAGAAGCAGCGCCTGACCGCGAAGATCGTGCTCGATTCGCGACCCGACGCGCTGACCGTGCCGCGCGGACCGTTCCTCGAGGACGGCGCCGGCCGCGTCGCCTATGTCGTCGACGGCAAGCTCGCCACCCTGCGCCCGATCAAGACCGGCGCTGTCGGCGTGTCCGACGTGGAGATCCTCGACGGCCTGCGCGAAGGCGAGCAGGTCGTCATTTCCAGCACCAGCGCGTTCGAGCAGGCCAAGACGGTCCTGATCCGCTGA
PROTEIN sequence
Length: 424
MIRDTSQSDIIVARESRFGRKKLLLAAVAAGTLLLGVSAYSAVSPWLSAERTVSADRLRIMPVVRGNFERSISVQGTVDAAIRPTVYSLSEGVVTLHVKAGDTVEKGQLIAEIDNPEARSALKQEEARLQQVSTDLARLRITSDQQKLANAQELALQRIELDAAERRVRRTGEALAKNVISRQDHEEAEDTLATAQTRLKHNSERVRLESDRLNFEVKSKALEVEQQELALAEVRRRVEELRILSPTAGVVGNIAVQERDKVALNQALMTVVDLSAYEVLVTIPESYSDDLAPPLKASINVQGRVFTGSLTSISPEVRDGHVEGRIALDDSSGAGLKQKQRLTAKIVLDSRPDALTVPRGPFLEDGAGRVAYVVDGKLATLRPIKTGAVGVSDVEILDGLREGEQVVISSTSAFEQAKTVLIR*