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scnpilot_p_inoc_scaffold_12_296

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(374588..375400)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFY9_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 246.0
  • Bit_score: 124
  • Evalue 1.60e-25
Collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 246.0
  • Bit_score: 124
  • Evalue 4.50e-26
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AEA43610.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluvi similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 246.0
  • Bit_score: 124
  • Evalue 2.20e-25

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 813
ATGAAACGCCTGCTCGCGTACTGCGTACTGCTGCTGGCCGCCGCATCGGACGCGGCGTTCGCGGTAACGCCGCAATCCGCGGCATTCACCTATCAGGGCAGCCTCAGCGCGAACGGGCAGCCCGCCAACGGCAATTTCGATCTGACGTTTGCCCTGTTCGACGACCCCGCCGGCGGCAATCAGGTCGGCGCCACACTTTCCCAGCCGCAATACCCGGTGGCGCAGGGCGTATTCACCATCGACCTGAATTTTCCGGGCGCCTTCACCGGCAATCAGCTGTGGCTGCAGGTTTCGGTCAACGGCATGCCGGTGCTGCCGCGCCAGGCGGTGAATGCCGCGCCGGTGGCGCAGTACAGCTTGAACGGCAGCACACGCGGGCAGGGCATCTATGAGGTCTACGGCACCGGGCAACTCGTCGTCAATACGGGGGTAGTGGCCTACACGGTGATTCCGGGACTGACGCAGACGATCTACGTGCCGGAGAACAGCGTCGTGCATGTACACAGCGACGGCGGCGTGCAGAGCACCGGCGCGACGTCGGCGACGTATTCGGTAGTCGATATTGGCTTGTTCGTCGACGGCGCGGCGACCACTACGGGCGGGCAGCGCCGGCTCTCGATCGCCAACACCACCGCACTCGCCCAACTGATCGCGAACTGGTCGATCGACCATACCTACTCGTTGCCGGCGGGCAACCACACCTTCGACGTCAGAGCGATCAGCGGCGCGAGCGGCAGCAGCCCCGCGAATGTCAGCAGCGGTTCGGCTCCGCAACTGCGCGGCGTGCTGACGGTGACGGTAATCAATCGGTAA
PROTEIN sequence
Length: 271
MKRLLAYCVLLLAAASDAAFAVTPQSAAFTYQGSLSANGQPANGNFDLTFALFDDPAGGNQVGATLSQPQYPVAQGVFTIDLNFPGAFTGNQLWLQVSVNGMPVLPRQAVNAAPVAQYSLNGSTRGQGIYEVYGTGQLVVNTGVVAYTVIPGLTQTIYVPENSVVHVHSDGGVQSTGATSATYSVVDIGLFVDGAATTTGGQRRLSIANTTALAQLIANWSIDHTYSLPAGNHTFDVRAISGASGSSPANVSSGSAPQLRGVLTVTVINR*