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scnpilot_p_inoc_scaffold_107_2

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(117..1016)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBT0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 289.0
  • Bit_score: 458
  • Evalue 3.90e-126
Transposase {ECO:0000313|EMBL:EIT71345.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 289.0
  • Bit_score: 458
  • Evalue 5.50e-126
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 287.0
  • Bit_score: 376
  • Evalue 5.50e-102

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGGTCTCGGCCGATGCGGGGTGACGAAGGTGCACACCATGGCGATGTATGCGAAGGTCCGGCGGCTGAGGTTGCGGGACGGGTTGTCGATCAGCGAGATCGCGCGGCGAACGAGCCTGTCGCGTAACACGATCAAAGCCTGGCTGCGCGAGCCAGCGCGGCGGGAGATGAAGTACCAGCGCACGCCGGCGAGCAAGAAGCTGGACGTGTTCGAGGCGTGGCTACGCCACGCTCTGGAAGTCGATGCGCGACGGCCGCGCTCGCAACGCCGCACAGCGCGGCGCCTGCACGAACAGCTCAAGGCCGAGGGATTTTCCGGCCACTATTCGCGCGTCACCGAGGCCATCCGAGCGTGGCGAGCACAGGCGGGCGCCGTCACCGCTCGGTCGGCCTATGTGCCGTTGACCTTCGCGTGGGGCGAGGCCTTCCAGTTCGACTGGAGCGAGGAAGGGATCGTGATCGGCGGCATCTGGCGGCGGGTGCAGGTGGCGCATATGAAGCTGTGCGCGAGCCGCGCGTTCTGGCTGGTCGCGTATCCGAGCCAGGGTCACGAGATGCTGTTCGACGCCCATGCCCGCTGCTTTGTCGGGCTGGGTGGTGTCGCTCGCCGCGGCATCTACGACAACATGAAGACGGCGGTGGACCGCGTGCCAGGCAGAGGCAAGGCACGGGTCGTCAACGCACGCTTTGCGGTAATGGCGGCGCACTATCTGTTCGACCCGGACTTCTGCAACGTGGCGTCCGGCTGGGAGAAAGGCCGGGTCGAGAAGAACGTCCAGGACGCACGGCGACGGATCTGGCAGACGACGCTGGAGCAGCGCTTCGCCTCGTTCGCCGAGCTCAATGTGTACTTAGCCACGCAGTGCGTGATGACGCGCAGCGCCGCGCATCCGGAATGA
PROTEIN sequence
Length: 300
MGLGRCGVTKVHTMAMYAKVRRLRLRDGLSISEIARRTSLSRNTIKAWLREPARREMKYQRTPASKKLDVFEAWLRHALEVDARRPRSQRRTARRLHEQLKAEGFSGHYSRVTEAIRAWRAQAGAVTARSAYVPLTFAWGEAFQFDWSEEGIVIGGIWRRVQVAHMKLCASRAFWLVAYPSQGHEMLFDAHARCFVGLGGVARRGIYDNMKTAVDRVPGRGKARVVNARFAVMAAHYLFDPDFCNVASGWEKGRVEKNVQDARRRIWQTTLEQRFASFAELNVYLATQCVMTRSAAHPE*