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scnpilot_p_inoc_scaffold_107_149

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 174710..176551

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163408 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 633.0
  • Bit_score: 779
  • Evalue 3.80e-222
Transcription termination factor Rho n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ39_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 633.0
  • Bit_score: 779
  • Evalue 2.70e-222
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 620.0
  • Bit_score: 769
  • Evalue 1.00e-219

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1842
ATGCGAGGTTTGCCCGTGTCTGATATCGAGAACAAGGAAAACGGCTCGGCCGCAACGGCCGACGCGCGTCCTGAATCCCCATCGCCGTCCGCCGCCGCTGAAGCGCGCGCCGCGCGCCGCGAAGCGCAGGCCGCCCGCGCCGCCGCCAAGGCTGAGGCCGCCGCCCGCAACGAAGCCGGCCCCGGCAATGAGGCCCCGGCCCGTGAAGAACGTCCGCAGCGCCAGGAACGCGGCAGCAGCGAAGGCGAACGCCAGTCGTCGAACAACGACCTGTTCAGCGCCTCCGGCGCCGAAGGCAACAGCAACGCACATGCCGGCAACCGCGGCGACAACGATGCCGACGGCAACGGCAACGGCAACGGCGACAACGCGCAGAACGCGCAGGGCCAGGCCCAGAACAACGGCCAGCAGGGCGGCGGCCAGTACCAGCAGGGCCAGGGTCAAGGCCAGGGCCGTCGCGAAGGCCGCAACCGCAACCGCAACCGGCAGAACCGCCAGCAGCAGCAACAGATGCGCGGCGGCAACTACGAAGACGAGATTCCCGACGAGCGCAACGGCGGCGGCAACGGTCCGCTGATCAACCTGACCGAACTCAAGCGCAAGCCCGCCGCGGCGGTACTCGAGATCGCCGAAAGCCTCGGCATCCAGGAAGGCGTCGCCCGTGCCCGCAAGCAGGACGTCATCTTCAACATCCTCAAGGCACATGCACGCGCCGGCGGCGGCATCTGGGGCGAAGGCGTGCTGGAAATCCTGCAGGACGGCTTCGGCTTCCTGCGTTCCGGCGACGAGTCCTACCTGGCCGGCCCCGACGACGTCTACGTCAGCCCGAGCCAGATCCGCCGCTTCAACCTGCGCACCGGCGACTACATCACCGGCCGCATCCGGCCGCCGAAAGACGGCGAACGCTACTTCGCGCTGCTCAAGCTCGACGACATCAACAGCGAGCCGCCCGAAGCGTCCAAGAACAAGGTGCTGTTCGAGAACCTCACGCCGCTGTTCCCGCGCAAGGCGTTCCGCCTCGAACGCGGCAACGGCTCCTCGGAAGACATCAGCGGCCGCATCCTCGATCTGATGTCGCCGATCGGCAAGGGCCAGCGCGGCATCATCGTTTCGCCGCCGAAGGCCGGCAAGACCATGATGCTGCAGAACGTCGCGCAGGCGATCGTGCACAACCATCCGGAAGTGCATCTGATCATCCTGCTGATCGACGAGCGCCCGGAAGAAGTCACCGAAATGGTCCGCGGTGTGCGCGCGGCCGAAGTCATCAGCTCCACCTTCGACGAACCGGCCGCACGCCACGTGCAGGTCGCCGACATGGTCATCGAACGCGCCAAGCGTCTCGTCGAGCACAAGCGCGACGTGGTGATCCTGCTCGACTCGATCACGCGCCTGGCCCGCGCCTACAACACCGTCGTGCCGAGCTCGGGCAAGGTGCTGACCGGCGGCGTCGACGCCAATGCGCTGCAGCGCCCGAAGCGCTTCTTCGGCGCCGCGCGCAACGTGGAAGAAGGCGGCTCGCTGACCATCCTCGCGACCGCGCTGGTCGACACCGGCTCGAAGATGGACGAGGTCATCTACGAGGAGTTCAAGGGCACCGGCAACATGGAAGTGCACCTGGACCGCCGCATCACCGAGAAGCGCGTCTACCCGGCGATCAACATCAACCGCTCCGGCACGCGCCGCGAGGAATTGCTGATCGAGCCGGACATGCTGCAGAAGATCTGGATCCTGCGCAAACTGCTGCATCCGATGGACGAGCTGGCCGCCATGGAATTCCTGCTCGACAAGATGAAGAACACCAAGTCCAACGACGAGTTCTTCGCGACGATGAAGCGCGGCTGA
PROTEIN sequence
Length: 614
MRGLPVSDIENKENGSAATADARPESPSPSAAAEARAARREAQAARAAAKAEAAARNEAGPGNEAPAREERPQRQERGSSEGERQSSNNDLFSASGAEGNSNAHAGNRGDNDADGNGNGNGDNAQNAQGQAQNNGQQGGGQYQQGQGQGQGRREGRNRNRNRQNRQQQQQMRGGNYEDEIPDERNGGGNGPLINLTELKRKPAAAVLEIAESLGIQEGVARARKQDVIFNILKAHARAGGGIWGEGVLEILQDGFGFLRSGDESYLAGPDDVYVSPSQIRRFNLRTGDYITGRIRPPKDGERYFALLKLDDINSEPPEASKNKVLFENLTPLFPRKAFRLERGNGSSEDISGRILDLMSPIGKGQRGIIVSPPKAGKTMMLQNVAQAIVHNHPEVHLIILLIDERPEEVTEMVRGVRAAEVISSTFDEPAARHVQVADMVIERAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTILATALVDTGSKMDEVIYEEFKGTGNMEVHLDRRITEKRVYPAININRSGTRREELLIEPDMLQKIWILRKLLHPMDELAAMEFLLDKMKNTKSNDEFFATMKRG*