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scnpilot_p_inoc_scaffold_26_117

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 141789..142202

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNN8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 143.0
  • Bit_score: 155
  • Evalue 3.30e-35
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 143.0
  • Bit_score: 155
  • Evalue 4.50e-35
small protein A (tmRNA-binding) similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 145.0
  • Bit_score: 153
  • Evalue 3.50e-35

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGAAGTGTTTGACCCGTTCCCTGTGCGTGCTGGGCCTGACCGTCGCCCTCAGCGGCTGCGGCGTGATCTACAGGCCGGACGTGCAGCAGGGCAGCCTGCTTTCCAAGACCACCGTCGATCAGCTCAAGCCCGGCATGAGCAAGCGACAGGTCACCCTGCTGCTGGGTACGCCGTCGGTCACGAGTCCGTTCGAAAGCAACCGCTGGGACTACGTCTCGTCGATCCAGCGCCGCGGCGGCAAGGTCAAGACCAAGAACCTGAGCCTGACCTTCGAGAACGATGCGCTGGCCAAGATAGAAGGCGACTATTTCCCCGAAGATCCGGCCCAGCTCATCAAGGACGCGAAGAAATACCGCGTCGAATTCCCCGACGAAAAGCGCCCCGACGACAAGAAGAAGGGCGGCCGCGGCTAA
PROTEIN sequence
Length: 138
MKCLTRSLCVLGLTVALSGCGVIYRPDVQQGSLLSKTTVDQLKPGMSKRQVTLLLGTPSVTSPFESNRWDYVSSIQRRGGKVKTKNLSLTFENDALAKIEGDYFPEDPAQLIKDAKKYRVEFPDEKRPDDKKKGGRG*