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scnpilot_p_inoc_scaffold_26_261

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(307606..308514)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas RepID=UPI00037DC8E4 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 298.0
  • Bit_score: 281
  • Evalue 1.10e-72
Transcriptional regulator {ECO:0000313|EMBL:EJM04558.1}; TaxID=1144322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 292.0
  • Bit_score: 279
  • Evalue 7.90e-72
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 296.0
  • Bit_score: 275
  • Evalue 1.30e-71

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Taxonomy

Pseudomonas sp. GM16 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGAGCGAATCCGTTTCCGACATCGCCGTGTTCGTCGCCTGTGCCGACGGCGGCCGGCTCAGCCTCGCGGCGCGCACGCTCGGCATCACCCTGGCCGTGGCCAGCGCGGCGCTGAAGCGGCTGGAGGCGCAGCTCGGCGTGCGCCTGATCCTGCGCACCACACGCAGCCTGCGTCTGAGCGCCGAGGGCGAACGCTATCTGCCGCATGCGCGCGCCGCGCTCGACGCGCTGCGTGCCGGACGCCTCGCGCTGAGTCGCGATGCGGAAGCGCTGAACGGTCTCGTACGCGTGACTGCGCCGGCGGATTTCGGCCGCAACCGCCTGGCCGGCTGGCTCGCCGATTTCGCCGCGCGCCATCCGGGCGTGCGCTTCCAGATCACGCTCGACGACGCGATCGCCGACTTCTTCGCCGCGCCGGTGGATCTGGCGCTGCGCTACGGCACGCTGAGTGATTCCAGCCTGATCGGCGTGCCGCTGGCCCGCCTCGAACGCGTGGCCTGCGCCGCACCCGACTACCTCGACCGGCGCGGCGCGCCGCTGCATCCGCAGGAGCTCGCCGACCACGACGCGCTGTGCTACATGCGCCAGTACCGGCCCGTGGACCGCTGGAGCTTCTTCCGCGGCGCCGAGGCCTGCGAGGTCGGCGTGACGCCGCGCTGGACCTTCAACGATGCGGAGATGGTGCGGCGCTGGGCCGTGCGCGGCCGCGGCATCGCCTACCGCATCTGGGCCGACATCGTCGAGGACGTGGCCGCGGGCCGCCTGCAGCGCGTGCTGCCAGAATGGCGCGGCGAAGCCACGCCGCTGAGCCTCGTCTATACCGAACGGCGCCTGTCGCCGGCGCTGCGCGCGCTGATCGACTTCCTGCTCGAACGCCGCGATGAACTCGAGAACTGCGCGCCGGACTGA
PROTEIN sequence
Length: 303
MSESVSDIAVFVACADGGRLSLAARTLGITLAVASAALKRLEAQLGVRLILRTTRSLRLSAEGERYLPHARAALDALRAGRLALSRDAEALNGLVRVTAPADFGRNRLAGWLADFAARHPGVRFQITLDDAIADFFAAPVDLALRYGTLSDSSLIGVPLARLERVACAAPDYLDRRGAPLHPQELADHDALCYMRQYRPVDRWSFFRGAEACEVGVTPRWTFNDAEMVRRWAVRGRGIAYRIWADIVEDVAAGRLQRVLPEWRGEATPLSLVYTERRLSPALRALIDFLLERRDELENCAPD*