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scnpilot_p_inoc_scaffold_26_340

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(397319..397528)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=8 Tax=Stenotrophomonas RepID=B4SST1_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 69.0
  • Bit_score: 136
  • Evalue 1.40e-29
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 69.0
  • Bit_score: 136
  • Evalue 3.80e-30
Cold shock protein CspA {ECO:0000313|EMBL:EZP43095.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 69.0
  • Bit_score: 136
  • Evalue 1.40e-29

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCGAATCGTCAGACTGGCACCGTCAAGTGGTTCAACGACGCCAAGGGCTTTGGTTTCATCACCCCGGAAAGCGGCGCTGACCTGTTCGTGCACTTCCGCGCGATCCAGGGCACCGGTTTCAAGACCCTTCAGGAAGGCCAGCGCGTGACTTTCGTCGCCGTGCAGGGCCAGAAGGGCATGCAGGCCGACCAGGTTCAGGTTGTCTGA
PROTEIN sequence
Length: 70
MSNRQTGTVKWFNDAKGFGFITPESGADLFVHFRAIQGTGFKTLQEGQRVTFVAVQGQKGMQADQVQVV*