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scnpilot_p_inoc_scaffold_27_35

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(42414..42971)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A05_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 175.0
  • Bit_score: 207
  • Evalue 1.70e-50
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 175.0
  • Bit_score: 207
  • Evalue 4.70e-51
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ82121.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 175.0
  • Bit_score: 207
  • Evalue 2.30e-50

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Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGACGAGAGCATCGACATCACCCGGCAGATCGACGCGGCGCGCGCGGGCGATACCGCAGCACTGGATGCGCTGTTCCCGATCGTCTACGACGAGCTGCGGCGGCTGGCGCGCGCCGCGCTCGCGCGCGAACGCGCCGACCACACCCTGCAGCCGACCGCGCTCGTGCACGAGGCCTATCTGCGCCTGGTCGCGCAGCACAGCGCCGACTGGTCGGGCCGCGCCTATTTCTTCAGCCTTGCCGCCAGCCTGATGCGGCGCATCCTCGTCAATCACGCGCGCGACCGCACGGCGCTCAAGCGCGGCGGCGGCGCGGCCGCAGTCACCTTGTCGGAAGCCGAGCGCGTCGCCGACGGCGAACTCGATGTGCTCGGGCTGCACGAGGCGCTGGAGCGCCTGGCCGCCCTGGACCCGCGCCAGGCGCGCGTGGTCGAGCTCAAGTTCTTCGGCGGCCTGGAGATCGACGAGATCGCCGGTGTCGTCGGCGTTTCGCCGGCCACGGTGCGGCGCGACTGGAGCCTTGCGCGGCTCTGGCTCGGGCGCGAGCTGTCGGCATGA
PROTEIN sequence
Length: 186
MDESIDITRQIDAARAGDTAALDALFPIVYDELRRLARAALARERADHTLQPTALVHEAYLRLVAQHSADWSGRAYFFSLAASLMRRILVNHARDRTALKRGGGAAAVTLSEAERVADGELDVLGLHEALERLAALDPRQARVVELKFFGGLEIDEIAGVVGVSPATVRRDWSLARLWLGRELSA*