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scnpilot_p_inoc_scaffold_27_64

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(79593..80681)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HylD n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B39588 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 364.0
  • Bit_score: 350
  • Evalue 1.80e-93
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN42402.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 328.0
  • Bit_score: 337
  • Evalue 2.20e-89
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 323.0
  • Bit_score: 283
  • Evalue 1.00e-73

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Taxonomy

Arenimonas oryziterrae → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGCTGCGCACCGTACGCCCTGTCCGCGTTTCCCTGTCCGTGCTCGCGCTGAGCATTGCCGCTGCCGTGTCGACGACGGCGCACACCCAGGGCCCGCCGGGTCATGAGATGCCGCCGACCACGGTCGAGGCGGCCAAGCCGCGTGTCGAATCGGTCAGCGAAACCCTGGCTGCGGTCGGCACGCTGCGCGCCGACGAGGCCGTGACCATCCGTCCCGAACTCGCCGGCCGCATCGAGGCCGTGCTGTTCGACGAAGGCCAGAAGATCAACAAGGGCGCGCCGCTGTTCCGCCTCGACGCGAGCCTGGTCCAGGCCGATGTCGCCGAAGCCGAAGCCAACTCGGCCAACAGCAGCCGCGAGCTCAAGCGCGCGCAGGAGCTGTCCGAACGCAAGCTCATCGCACCGGCCGACGTCGACACCAAGCGCGCCCAGGCCAAGGTCGACGACGCCAAGCTCGCATCCAGCCGCACGCGCCTGGGCAAGACCGAGATCCGCGCGCCGTTCACCGGCACTGCCGGCCTGCGCCGGGTCAGTCCCGGCGAGTACGTCAACATCGGCGACGCGCTCGTGGATTTCGTCGCGCGCGACACGCTCAAGCTCGACTTCAGCCTGCCCGAGGTCTACCTCGGCCGCTTCCAGGCGGGCCAGAAGATCACGATCAGCGTCGACGCGCAGGGCGCGCGGCGCTTCGACGGCGAGGTCTACGCCATCGCCCCGCAGGTCGACCTCGCGACACGCTCGGTGACCCTGCGTGCCCGCGTGCCGAACGTCGACGGCCTGCTGTTTCCGGGCCAGTTCGCCAAGGTGTCGCTGGAGATCGGTTCGCGCGACAACGCGCTGCTGGTGCCGGAACAGGCGCTGTGGCCGCAGGGCGACAAGCAGCAGGTCTACGTGATCCGCGACGGCAAGGCCGAACTCATCGAAGTGAAGACCGGCCTGCGCAAGCCCGGCTTCGTCGAGATCGTCAGCGGCATCAGCGCCGGCGACGAGGTCATCAGCGCCGGCCAGATGAAGATCGGTCCCGGCGCCAAGGTGCAGACCGCACCGCCGGCCGCCGCCCAGCCTGCCGCAGCGCAGCCGGCGCATTGA
PROTEIN sequence
Length: 363
MLRTVRPVRVSLSVLALSIAAAVSTTAHTQGPPGHEMPPTTVEAAKPRVESVSETLAAVGTLRADEAVTIRPELAGRIEAVLFDEGQKINKGAPLFRLDASLVQADVAEAEANSANSSRELKRAQELSERKLIAPADVDTKRAQAKVDDAKLASSRTRLGKTEIRAPFTGTAGLRRVSPGEYVNIGDALVDFVARDTLKLDFSLPEVYLGRFQAGQKITISVDAQGARRFDGEVYAIAPQVDLATRSVTLRARVPNVDGLLFPGQFAKVSLEIGSRDNALLVPEQALWPQGDKQQVYVIRDGKAELIEVKTGLRKPGFVEIVSGISAGDEVISAGQMKIGPGAKVQTAPPAAAQPAAAQPAH*