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scnpilot_p_inoc_scaffold_129_119

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(132492..133073)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D14F6 similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 186.0
  • Bit_score: 241
  • Evalue 6.30e-61
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 176.0
  • Bit_score: 215
  • Evalue 6.80e-53
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 177.0
  • Bit_score: 201
  • Evalue 2.00e-49

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGGACCGATCGAACTTCGCCATTGATGTGCCCGACAGCCTGCTGGCCCGCGCCCAGAACGGCGAGCTGCGTGCGTTCGAGCAGATCTACCGGCTGTTCGAACGGCCGGTCTATACCCTCGCGCTGCGCCTGCTCAACGATGCCGACGCCGCGCGCGAGATCCTGCACGACGCGATGCTCAAGCTGTTCCAGCGTCTGGACCAGTTCCGCGGCGACGCGCCGTTCTGGGGCTGGCTGCGCCAGATCGCGCTGAACGAGGCGCTGATGCGCCTGCGCAAGGACCGCCGCATCGAGTTCGACGCGCAGGTCGAGGACGTGGAAACCGACGCGGCACCGCCCTGGGTTCACGCCGACGGCCTGGTGCTGGAGCAGGCCCTGGGCCGCCTGCCGGCGCTGACGCGCAGCGTGCTGTGGCTCTACCACGTCGAAGGTTATTCGCACCCGGAGATCGCCGACGCTCTCGGCAAGAGCGTCAGCTTCTCCAAATCCCAGGTCGCCCGCGGCACCGCCCGGCTGCGCGGCTTCCTGGACGGCACACCGGAGTCCAAGCCATGTCTGATCGCCAATCCGCAACCGAGTTGA
PROTEIN sequence
Length: 194
VDRSNFAIDVPDSLLARAQNGELRAFEQIYRLFERPVYTLALRLLNDADAAREILHDAMLKLFQRLDQFRGDAPFWGWLRQIALNEALMRLRKDRRIEFDAQVEDVETDAAPPWVHADGLVLEQALGRLPALTRSVLWLYHVEGYSHPEIADALGKSVSFSKSQVARGTARLRGFLDGTPESKPCLIANPQPS*