ggKbase home page

scnpilot_p_inoc_scaffold_290_105

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 111379..113580

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase type IA zn finger domain-containing protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC951 similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 731.0
  • Bit_score: 737
  • Evalue 1.40e-209
  • rbh
Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EIK61957.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 535.0
  • Bit_score: 526
  • Evalue 5.20e-146
DNA topoisomerase type IA zn finger domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 740.0
  • Bit_score: 453
  • Evalue 1.10e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2202
ATGAGCGGTTCCGTTCAGATCGCCGGAAAGCGCACGGCCCTCGGGAAACCTCTTGGCCGTGGAGGGGAAGGCGACGTGTACGCCCTGCCCGAGCAAGCCGGCCTCGCTGTGAAGATCTACAAAGAGGCGATCCGATCGTCGCGCGAAGGAAAAGTGCGCGCCATGGTCGAGAGCCGGCTCGCGGAACGCACCACGCTCGTCGCGTTCCCGACCGCGCTGGCCACCGACGGGTCGGGCGCGTTCGCCGGCTTTGCGATGCGGCTGGTGTCGGGATACCGGCCCATCCACGAGCTGTACAGCCCCAAATCTCGAAAGATCCAGTTTCCGCAGGCCGACTACCGCTTTCTGGTCCAAGCTGCCCAGAACGCCGCGCGCGCGGTGGCGACGGTACATCAAACCGACTGCGTCATCGGGGACTTCAATCATTCGGGCGTGCTCGTAGCCAACAACGCCACCGTCACGCTAATCGACGCGGACAGTTTTCAGTTCACCGCGAACGGCCGCGCCTACCCGTGCGTGGTGGGCACCGAAGACTTCACGCCTCCGGAACTTCACGGCAAGGAGCTGAGCCGCGTCGAGCGCACGCACGCGCACGACAACTTTGGATTGGCGGTGGTGATCTTTCAGTTGCTGGCCATGGGCAAGCATCCGTACATGGGTCGCTACAGCGGTGCGGACCTTTCGCTAGGGCAAGCCATCGCGCAGCACCGCTTCGCCTACTCCACGGTGCGGCAGAGCGCAACCCGGACGACGCCACCGCCGGCGTCGGTACAACTCAGCGATTTCCCTCCGCCGGTCGCATCGGCCTTCGAGGCGGCGTTCGGCCTCGATCCCGACGCGCGCCCGAGCCCGGCCACGTGGGTTCACCTTCTGGAGCAGCTGAAAACCAGCCTGCGTCGCTGCGGTTCTGCGCCCACCCACTACTTCCCGCATTCCGCGCAAAGCTGTCCGTGGTGCCGCATCGTCAGCCAGTCGGGCGTGGACATGTTCCCCCCGAGCCTCGATTCGTGGGTCGCCCGCCGCCCCGAAGTGCCGAGTGGCCCATTTGACTTCGGCGCGATCGCCGCCGCCATTCGTGCGGCAACGCTTCCCCGTCCTGAAGACGTGGTTCCCGTTTGGACTGGCGATCCGGGCCCTGCACTCCCGGCGCTCACCGCTGCCAGAACCAAGCAGACCTTTGCCCGACTGTTTGGCGGGCTGCTCATCCTGGCGGCCCTGGTCGGCTTCGCCAACGGGGGAGCCGGCGCAGTCTTCGGCGTTGTTCTCGCCGTGATAGGCCTGTTCCGAATCGGCACCGCAACGTTCGACGCCTCGCCGTTGCTGAAGGCCTACAGCGAAGCCGACAACCGCGTACGGGCGGCCTCTCTGGCGCATCTTCAACGGGTCGGGTTCACCGAACTGCTGGTGCTGCGCAACGAGTTGGAGAACTGCATCGCAGAGTATCCCCAGGTGGAAGGCAAACTTTCCCGCGATCTGGCGAACCTGCAGGCGAACCGGAAGGGTCGGCAACTGCACGCCTTCCTGGATCGTTGCCTGCTGCGTCGGGTGAAGATATCCGGCATTGGTCAGGCCAAGATGGCGGCGCTGGCGTCTTTCGGGATCGAATCAGCCGCGGACGTCGATTTCGCCAAGGTCATGGCTGTGCCCGGATTCGGGGAAGCGCTGACTCAGAAATTGCTCAAGTGGCGCGGCGAGCAGGAAGCAAAGTTCAGGTACAACCCTGCGCCGGATCCAACGGAACGGCAAGCCGAAGACGCGTTGAGGTCCGCGGCTGCCAGCAAACGTATCCAGTTGCAGGACAAACTTCGAGCCGGGCTGGCCGCACTGCAGACCGCACCGTCGAGGTTCGCCAGCGGCAAAGCGTCTCCGGCACCCGCGTTGGCGCAGGCGCTGTCCGACCGTGCACGCGCGGCGCGAGATTGCGCCACGGTGGGCGTCAAGGTGCCGCCACCCGGCGCCCTCAAGCTTTCTGTCCCAACGCCCGCGCCGCCGGCACCGATGCCGCCGGCGCGGCCTCCCGGCCCCACCTCCCTTGCGGTACCGTCTTTGCCCGCTTGGAACTCTCCCGCGCCGCCATCCACCCCAACTTGTCCAGTGTGCAGCGCGGTCATGGTTCGGCGCCAAGCCCGCAAAGGCTCTCGCGCCGGGAGCTTCTTTTGGGGCTGCTCGCGCTTTCCCCAGTGCAGAGGAGTCAAGAACTGA
PROTEIN sequence
Length: 734
MSGSVQIAGKRTALGKPLGRGGEGDVYALPEQAGLAVKIYKEAIRSSREGKVRAMVESRLAERTTLVAFPTALATDGSGAFAGFAMRLVSGYRPIHELYSPKSRKIQFPQADYRFLVQAAQNAARAVATVHQTDCVIGDFNHSGVLVANNATVTLIDADSFQFTANGRAYPCVVGTEDFTPPELHGKELSRVERTHAHDNFGLAVVIFQLLAMGKHPYMGRYSGADLSLGQAIAQHRFAYSTVRQSATRTTPPPASVQLSDFPPPVASAFEAAFGLDPDARPSPATWVHLLEQLKTSLRRCGSAPTHYFPHSAQSCPWCRIVSQSGVDMFPPSLDSWVARRPEVPSGPFDFGAIAAAIRAATLPRPEDVVPVWTGDPGPALPALTAARTKQTFARLFGGLLILAALVGFANGGAGAVFGVVLAVIGLFRIGTATFDASPLLKAYSEADNRVRAASLAHLQRVGFTELLVLRNELENCIAEYPQVEGKLSRDLANLQANRKGRQLHAFLDRCLLRRVKISGIGQAKMAALASFGIESAADVDFAKVMAVPGFGEALTQKLLKWRGEQEAKFRYNPAPDPTERQAEDALRSAAASKRIQLQDKLRAGLAALQTAPSRFASGKASPAPALAQALSDRARAARDCATVGVKVPPPGALKLSVPTPAPPAPMPPARPPGPTSLAVPSLPAWNSPAPPSTPTCPVCSAVMVRRQARKGSRAGSFFWGCSRFPQCRGVKN*