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scnpilot_p_inoc_scaffold_290_15

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(15256..15840)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CEDB1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 179.0
  • Bit_score: 275
  • Evalue 4.00e-71
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL96261.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 180.0
  • Bit_score: 238
  • Evalue 5.80e-60
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 182.0
  • Bit_score: 235
  • Evalue 1.30e-59

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAATACCGCCGCCTGCGTCCCCATGAGTCATGCCATGCCTGAGTCGGCACCCGCTGCAGCCGACGACGGCGCCCTGGTCCGACGTTCGATGAGCGGCGACATCCGCGCCTTCGAACTGCTCTACCGCAAGCACGTCGGCCGCGTACACGGCGCTATCCTGCGCATCGTCGGCATGAACCATGCGCGGGCCGAGGAACTGACCCAGGATGCCTTCGTGCGCGCCTGGCAGAAGCTCGGCGGCTTCCGCTTCGAAAGCGCGTTCTCGACCTGGCTGTACCGGCTCGGCGTCAACGTCGCGCTGATGGATCTGCGCGGCGGCAACGGCGAGCAGAACGTCGAGGACGAGGTGCTGGAGCTGGCCGCCGGCGGCGACGTGCCGTTCTGCGCCGGCGAGCGCGCCGATCTGGAGCAGGCTGTGGCCAAGCTGCCGCCGCGCGCGCGGGCCGTGCTCGTGCTGCACGACGTGGAAGGGTGGAAGCATGAGGAAATCGCCAACGAGCTCGGCATGGCCATAGGCTCGTCCAAGGCGCAACTGCACCGGGCCCGCGGCCTGGTGCGCAAACTGCTCGGAGCCGCCGCATGA
PROTEIN sequence
Length: 195
MNTAACVPMSHAMPESAPAAADDGALVRRSMSGDIRAFELLYRKHVGRVHGAILRIVGMNHARAEELTQDAFVRAWQKLGGFRFESAFSTWLYRLGVNVALMDLRGGNGEQNVEDEVLELAAGGDVPFCAGERADLEQAVAKLPPRARAVLVLHDVEGWKHEEIANELGMAIGSSKAQLHRARGLVRKLLGAAA*