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scnpilot_p_inoc_scaffold_324_25

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(18589..19440)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2I4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 283.0
  • Bit_score: 547
  • Evalue 6.10e-153
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EXJ52219.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 283.0
  • Bit_score: 549
  • Evalue 2.20e-153
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 276.0
  • Bit_score: 322
  • Evalue 1.50e-85

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGACATTCCTGTCGGTCGCGCGCCTGGGTCGCTACACGGCCGCCGCCGAGGTTCTCGGGGTCAATCACTCCACGGTGTCCCGTCGGGTCACGGCGCTCGAGTCCGCGATGGGAGGACGTGTCCTGGTCCGCACCGCCGGCGGCTGGGAGGTCACCGATCTCGGTCACCGTGCGGTGACGATCGCCGAGCGCATCGAAGCGTCACTGCGCGAGCTCATCGACGGGGAGAACGCCGATGCCGTGCACGGCATGGTGCGCGTCTCCGCCCCCGATGCCTTCACCTCGGTCTTCCTCGCACCGGCGATGACCGCTCTGCGACGCGAGCACCCGCAGCTCGCGGTCGAGCTGCTCTCGGCGACGCAGCGTGTCCGCCAGAACCGCTCCGGCGTCGATCTGGAGATCGTCGTCGGTCGACCTCAGGTGCTGCGGGCGTACGCGACGCCGGTCTGCGCGTACGCGCTTCGTCTCTACGCGACACCCGACTATCTCGACGAGGCGGGTAGGCCCGACTCGATCGCCGAGCTGGCCGCACACCCCCTCGTGTACTACGTGGAGAGCTCGCTGCAGGTCGATGAGCTCGACCGCGCGCTGCAGGAGCTGCCGGACTCGCCGGCATCCGTCCGTTCGACGAGCGTCTTCGCACACGTCGAGGCGACGGCGGCCGGAGCGGGCATCGGCATCCTGCCCGATTTCCTCGGCGACGCCGACCCGCGCCTGACCCGGGTGCTGGACGGCGCCTACGCGCACCCTCTCGCCTACTGGGCCGTCGCTCGCGACGAGGGGCCTCGAAACCCCGCCGTCGCCGCCACCTTGGAAGCCCTCATCTCGTACATCGAAACGGTCCGAGGATGA
PROTEIN sequence
Length: 284
MTFLSVARLGRYTAAAEVLGVNHSTVSRRVTALESAMGGRVLVRTAGGWEVTDLGHRAVTIAERIEASLRELIDGENADAVHGMVRVSAPDAFTSVFLAPAMTALRREHPQLAVELLSATQRVRQNRSGVDLEIVVGRPQVLRAYATPVCAYALRLYATPDYLDEAGRPDSIAELAAHPLVYYVESSLQVDELDRALQELPDSPASVRSTSVFAHVEATAAGAGIGILPDFLGDADPRLTRVLDGAYAHPLAYWAVARDEGPRNPAVAATLEALISYIETVRG*