ggKbase home page

scnpilot_p_inoc_scaffold_532_36

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 39935..40663

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Microbacterium RepID=H8E1N6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 243.0
  • Bit_score: 462
  • Evalue 2.20e-127
  • rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KIC58274.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 242.0
  • Bit_score: 476
  • Evalue 2.70e-131
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 236.0
  • Bit_score: 351
  • Evalue 2.00e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GTGACCGCGACACTCGCACCCCTGGTGCCGGACATCGCCGACGTAGACTGGGCCCTGATGGAAGAGCACGCGGCCCTCGAGTCGCCGACCCCCGAAACCCCGGCCACAGACCTCGTCCCGGCGGACGAGGTCGACAGCGCCGCGGACGCCCGTGCGCAGTTCGAGCAGCAGGCGCTGCCGTTCATGGATCAGCTGTACGCCGCGGGCATGCGGATGACGCGCAACCCGGCGGATGCGGCCGATCTGGTGCAGGAGACGTTCGTCAAGGCCTTCGCATCCTGGTCCTCTTTCACGCAGGGCACGAACCTCAAGGCGTGGCTGTACCGCATCCTGACGAACACGTACATCAACACGTACCGCAAGAAGCAGCGCGAGCCCTATCAGGGCACGATCGACGATCTCGAGGACTGGCAGCTCGGCGGCGCGGAGTCCACGACAGCCACCAGGAGCCGCTCGGCGGAGGCGGAGGCGATCGACCACATGCCGGCATCCGCGGTCAAGGACGCGCTGCAGTCGATTCCGGAGGATTTCCGTCTCGCGGTGTACCTCGCCGACGTCGAGGGCTTCGCGTATCAGGAGATCGCGGACATCATGAAAACCCCCATCGGCACGGTCATGAGCCGCCTGCATCGTGGCAGGCGCATGCTGCGTGACCTCCTCGCCGACTACGCGCGCGAGCGCGGCATGGACGTGCCGGTGCCCGCGACTTCATCAGGGAGCAAGAAATGA
PROTEIN sequence
Length: 243
VTATLAPLVPDIADVDWALMEEHAALESPTPETPATDLVPADEVDSAADARAQFEQQALPFMDQLYAAGMRMTRNPADAADLVQETFVKAFASWSSFTQGTNLKAWLYRILTNTYINTYRKKQREPYQGTIDDLEDWQLGGAESTTATRSRSAEAEAIDHMPASAVKDALQSIPEDFRLAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRDLLADYARERGMDVPVPATSSGSKK*