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scnpilot_p_inoc_scaffold_701_11

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 13316..14647

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E376_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 443.0
  • Bit_score: 861
  • Evalue 3.90e-247
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevanif similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 443.0
  • Bit_score: 859
  • Evalue 1.60e-246
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 445.0
  • Bit_score: 703
  • Evalue 2.90e-200

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
GTGACCTCAGGCACGAAGACCACCCGCTCCCGCAAGGTCGAGGAGGAGGAAGCCACGGAGTCCGCCACGGAACAGGCGACGACCACGACCGCCGCCAAGAAGGCGACGTCGAAGGCTCCGGCCAAGGCGAAGGCGGCGCCCAAGAAGGCGTCGAAGAAGACCGCGGACGACGACGAAGAGATCGACGACGACGTCGAGCTCGATGACACCGACATCGAGGACGCCGCGGACGACGAGTCCGGCGATGATGCTGCCGAGGCGTCGACCGGAGCCGCCGGCAAGAAGGGCGAGGACGACGACGAGGATGAGGACGGCACGACGAAGCCTGCATTCTCCGAGCCGCTCCCCACGGGCGCCATCGTCATTTCCTCGAGCGACGAGGACGATGTTCCCGTCTACTCGACACAGATCACCGGCGCGACCGCCGACCCCGTCAAGGACTACCTGAAGCAGATCGGTAAGGTCCCGCTGCTGAACGCGGCCGAAGAGGTCGAGCTCGCGATGCGGATCGAGGCGGGTCTGTTCGCCGAAGAGAAGCTCTCGCACATGTCGGCGTCGGAGAAGTCGAGCCAGCTCGGGCTGGACCTCCAGTGGGTCGCTCGCGACGGCCAGCGCGCCAAGAGCCACCTGCTCGGCGCCAACCTGCGCCTGGTCGTCTCCCTCGCCAAGCGCTACACGGGCCGCGGCATGCAGTTCCTGGACCTGATCCAGGAGGGCAACCTGGGCCTCATCCGCGCGGTCGAGAAGTTCGACTACACCAAGGGCTTCAAGTTCTCGACGTATGCCACCTGGTGGATCCGTCAGGCGATCACGCGCGCCATGGCCGACCAGGCTCGCACGATCCGTATCCCCGTTCACATGGTCGAGGTCATCAACAAGCTTGCGCGCGTGCAGCGTCAGATGCTGCAGGACCTCGGCCGCGAACCCACGCCCGAAGAGCTCAGTCGCGAACTCGACATGACCCCCGAAAAGGTCATCGAGGTGCAGAAGTACGGGCGCGAGCCGATCTCGCTGCACACCCCCCTGGGTGAGGACGGCGACAGCGAGTTCGGTGACCTCATCGAGGACACCGAGGCGGTCGTCCCGGCGGATGCCGTCGGGTTCACCATGCTGCAGCGTCAGCTCGAGTCGCTGCTGGACTCGCTGAGCGAGCGCGAGGCGGGTGTGATCCGCATGCGCTTCGGCCTCGGTGATGGACAGCCCAAGACGCTCGACCAGATCGGCGATACCTTCGGCGTCACGCGCGAGCGCATTCGTCAGATCGAGTCGAAGACCATGGCGAAGCTCCGACACCCCTCGCGATCGCAGTCGCTGCGGGACTACCTCGAATGA
PROTEIN sequence
Length: 444
VTSGTKTTRSRKVEEEEATESATEQATTTTAAKKATSKAPAKAKAAPKKASKKTADDDEEIDDDVELDDTDIEDAADDESGDDAAEASTGAAGKKGEDDDEDEDGTTKPAFSEPLPTGAIVISSSDEDDVPVYSTQITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAEEKLSHMSASEKSSQLGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLESLLDSLSEREAGVIRMRFGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE*