ggKbase home page

scnpilot_p_inoc_scaffold_852_39

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 32233..34251

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3DB6C similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 645.0
  • Bit_score: 418
  • Evalue 1.00e-113
  • rbh
integrase, catalytic region similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 641.0
  • Bit_score: 340
  • Evalue 1.30e-90
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 670.0
  • Bit_score: 863
  • Evalue 2.20e-247

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Microbacterium_68_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2019
ATGACCATTCACCCGGGCGACATCATCCGGTGGCAGGGCGGAAGCCACCAGGTCGTCGCGATCCGACCCACCTATCTGACCTTGCGCGCCGTCGACGGCGACGGAGACGACGTGGAGGTTCTCGCCGCCGATCTGCGACATGAGGCGGAACCTGCCGCACCGGCATCGCTCCGCTCCCTGCTGGACTTGCGCAGCCTGCAGGACCTCGACGCGCGTGACCGCAAGATCGTCGACGTGTGGCTGGAGGAACTCGCCCGGTTCGATGAGCTCGTGGCGGCAGGCGTGACCAAGCCCGCGGCGCGGCAGCAAGTTATCGACAGCGTCAACCGTCGTCTCGGGACCGACTACAGCCCGGTCAAGGTCTCGCGTCAGCAACGCGCGCTCGAGGAGTTCGGGGTCAGCGGCCTTCTCGATCGACGTCGCCACGGCCTGGCCGACATGCCCGGTCGCTCCTACGACGAGCGCCTCATCGACGCGATCCTGACTGTCCAGGCCGGCCAGGAGCGGAAATCCACGGGCACCGGGACGCGACTGATCTGGCTCGTCCGCAGAGAGCTGGACGACCGCTTCGGCGAGAGCGTCGTGCCGATGCCGAGCCGCGCAACGATGTACCGGCTCCTGAGTGAGCTCGATGCGGGCAAGCACACGCTGGGGACTGCCCGTGCCCGTCGCACGACGGCTAACCAACCGGATCACATGCACGGGGTCCGGTCGGGGGTGCGACCTGGTGAGCAGGTACTGATCGACACGACGCCGATGGAGATCCTCGTCGAATGCGACGGTGAACCCGTCCGCCCCGATCTCACTCTGCTGTTGTGCGAGGCATCCCGGTCGGTGCTCTCCGGCATCGTTACCGTTGGCTCCCGCAGCATCGATCTGGTGGTGGTCCTCGCCCGCGCTCTCGTGCCGTACGCGTCGCGCCCCGACGGCGTGCGTGCGAACCGGCGTCAGGTGTCGGAGGCGTGGACCGGCACGGACGGGTTCATGGTGGAGCGGTTCGAGCTAATGCGTGACGCGCAGCCGTATGTCTTCCCGGAGTCGATAACGACCGACCGTGGCGCATCGTATGTGTCTCGGCACTTCTCCGATGCTTGTCGGACGTTGGGGATCTCGCTGACGGTCAACGCGGAGTATTCGCCGACGCAGAAGGCGAAGATCGAGCGGATGTTCCGCACCGTCAAGGACCTGTTCACCCAGTACGCGATCGCGTTCCTCGGGCAGAGCACCGACATGCGCGGCGACGAGATCATTGCGACGAGCCAGCTGCTCACCCTCGAGCAGCTGCAGGAGTTGTTCGAGGACTGGGTCGCGGTGAGCTGGCAGAACCGACCCCACAAGGCGTTGCGCGACCCCCGCAACCCTCGGCTGATGCTGACGCCGAACCAGATGGTCGCTGCGTACCGGGAGATCGCTCCGGAGCTGCAAGTCCCGCTCACGGCCGAGAAGTACATCGCGCTTCTCCCGACCGAGTGGCGTGTGATCAACCACTACGGTGTCGACATCGACCTGCGCGTCTACGACTCCACGGAACTCGGCCCGCTGCGGAAGAAGCGGTCACCGCATCATCGGCAGCAGGGCAAGTGGCCGTTCCACGTAGACCCATACAACCCGATGACGGTGTGGCTGGAGCTCGACGACCAGTTCCTCCCGCTGGACTGGCGATCTCCGTACAGCGGAGCTCCGATGGCCGACGAGGTATGGCGGGTCGCCCGCGCTCAGGCTGCCGCACGCGGCGAGAGCGAGCCGAGCACCGACGACCTCAACGAAGTGATGCGCCGGTTCATGTACAAGGGCAACGTTCCTCCGACGAAGCGGCAGAGGAAGCGTTCCGTAAGCGCACGGACGGACCCGCTGGCGATCACCCACCAACTCCCACACATCGCCCCCGCAGGTCCACCGCGCGGCGAGCTTGCGGCTGCAGACGGCGACGGCGACAAGGAACCCAATGCGGTCGCAGCGAAGCCTGCGTGGCCGGTCGCGGCACCGTTCGGGATGACCCGGTCGCCGGATGAGGCGTGA
PROTEIN sequence
Length: 673
MTIHPGDIIRWQGGSHQVVAIRPTYLTLRAVDGDGDDVEVLAADLRHEAEPAAPASLRSLLDLRSLQDLDARDRKIVDVWLEELARFDELVAAGVTKPAARQQVIDSVNRRLGTDYSPVKVSRQQRALEEFGVSGLLDRRRHGLADMPGRSYDERLIDAILTVQAGQERKSTGTGTRLIWLVRRELDDRFGESVVPMPSRATMYRLLSELDAGKHTLGTARARRTTANQPDHMHGVRSGVRPGEQVLIDTTPMEILVECDGEPVRPDLTLLLCEASRSVLSGIVTVGSRSIDLVVVLARALVPYASRPDGVRANRRQVSEAWTGTDGFMVERFELMRDAQPYVFPESITTDRGASYVSRHFSDACRTLGISLTVNAEYSPTQKAKIERMFRTVKDLFTQYAIAFLGQSTDMRGDEIIATSQLLTLEQLQELFEDWVAVSWQNRPHKALRDPRNPRLMLTPNQMVAAYREIAPELQVPLTAEKYIALLPTEWRVINHYGVDIDLRVYDSTELGPLRKKRSPHHRQQGKWPFHVDPYNPMTVWLELDDQFLPLDWRSPYSGAPMADEVWRVARAQAAARGESEPSTDDLNEVMRRFMYKGNVPPTKRQRKRSVSARTDPLAITHQLPHIAPAGPPRGELAAADGDGDKEPNAVAAKPAWPVAAPFGMTRSPDEA*