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scnpilot_p_inoc_scaffold_1261_29

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(22846..23994)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=2 Tax=Microbacterium RepID=H8E9Q6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 382.0
  • Bit_score: 736
  • Evalue 1.20e-209
  • rbh
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:EXJ51513.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 382.0
  • Bit_score: 740
  • Evalue 1.20e-210
putative ATPase, type II/type IV pathway secretion protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 374.0
  • Bit_score: 404
  • Evalue 3.20e-110

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
GCGGGGGCGTCGGCGAGTGTTGTGCAGGCGATCGCGGAACGTGTGCGCGACCGGCTTCGTGAGGAACAGGCCGATCCGCTCCGCCACCCCGATTGCGCCCACCAGGCGGCCGTAGCGGAGGTTCGCCGTCACAACGACTATGCCCTCGCCCGTGGGCTCGAGTTCGTCGACGACGAGGGCGCCGCCGTCCGCGACGTGCTTGCGCGGGTGACGGGCTACGGACCGTTGCAACCGCTGTTGGACGACCCGGAGGTCGAGGAGATCTGGATCAACGGTCCCGGTGCGGTCTTCGCGGCGCGCGCGGGGCGCAGCGAGCGCGTCCCGATGCGCCTCAGCGACGAGGCGGTGCGCGATCTCGTCGAGAAGATGCTGCACGCCACCGGACGACGGGTAGATCTCAGCCAGCCGTTCGTCGACGCGTCACTTCCGGACGGAAGCCGACTTCACGTCGTCATCCCCGACATCACGCGCTCGCACCTCGCCGTCAACATCCGCAAGTTCCTTCCCGCGCGGCGGAGTCTGGACGACCTCGTCGGCGCAGGATCGCTGCCCGCGCACGTCGCTGACATGCTGCGCGACGCCATGGTGGAGGGGCGAAACGTCCTGGTGTCCGGAGCCACACATGCGGGCAAGACGACGATGCTGGCGGCGCTTGTCGGCGGGTGTCGCCCCGAGCAGCGAATCATCACGGTCGAGGAGACCTTCGAACTGGCGGTCACGGCTCCCGACATCGTCGCCCTGCAGGGGCGCCAGCCGAGTCTGGAGGGGACGGGCGCGGTGAGCCTGCGTCGCCTCGTGAAGGAGGCACTGCGCATGCGCCCCGATCGCCTGATCGTCGGGGAGGTCCGTGACGCGGAGGCACTCGATCTCCTTCTCGCTTTGCATACCGGCGTGCCGGGCGCGGCGACGATCCACGCGAACAGCGCCGACGATGCCCTGTCGCGCCTGGCCACCCTGCCGTTGCTTGCGGGCCGCAACATCGACGCCGCGTTCGTCCAACCTGCTATCGCGACCGGCGTCCACCTTGTCGTGCACTGTCGGCGCGGCACCGGCGGTGAGCGATTCGTCGAGGAGGTCATCGAGACGACCGGTCGCATTCACGACGATGCCATCGACACCCGCGTCGTCTTTCGACGGGGCCGCTCATGA
PROTEIN sequence
Length: 383
AGASASVVQAIAERVRDRLREEQADPLRHPDCAHQAAVAEVRRHNDYALARGLEFVDDEGAAVRDVLARVTGYGPLQPLLDDPEVEEIWINGPGAVFAARAGRSERVPMRLSDEAVRDLVEKMLHATGRRVDLSQPFVDASLPDGSRLHVVIPDITRSHLAVNIRKFLPARRSLDDLVGAGSLPAHVADMLRDAMVEGRNVLVSGATHAGKTTMLAALVGGCRPEQRIITVEETFELAVTAPDIVALQGRQPSLEGTGAVSLRRLVKEALRMRPDRLIVGEVRDAEALDLLLALHTGVPGAATIHANSADDALSRLATLPLLAGRNIDAAFVQPAIATGVHLVVHCRRGTGGERFVEEVIETTGRIHDDAIDTRVVFRRGRS*