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scnpilot_p_inoc_scaffold_803_4

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(4443..5087)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=2 Tax=Microbacterium RepID=H8E245_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 212.0
  • Bit_score: 340
  • Evalue 1.10e-90
  • rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC58356.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis. similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 214.0
  • Bit_score: 385
  • Evalue 4.20e-104
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 202.0
  • Bit_score: 213
  • Evalue 7.50e-53

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGCCCCGCGCACTTCTTCGCGACGACGTGCACGCGCGCCTGCAGGAGGCGATCGTCGACGGCAGCCTCGCCCCCGGTGAGCAACTGCGCGACGCAGAACTGGCCGAGCGACTCGGCGTCAGTCGCACGCCCGTGCGAGAGGCGCTGCTCGAACTCGCTCAGGCCGGGCTCGTGCAGGCGACACCCGGGCGCTCCACCGTCGTCGCCCCGATCGACCCCGGCGCCCTCCGCGACGCGCAGGCCGTCGTTGGCGCCCTGCATGCCCTTGCCGTCCGCACGGCGACACCGCGCATGACGACGCGCGACCTCGATGCGATGCGCGCGGCGAACGCGGCGTTTCGTGCCGCACTGAGCGCCGGCGACATCGACGGCGCCCTCGAGGCGGATGCGCGCTTTCACCGCGTCGCCCTCGAGGTGTGCGCGAATGCGGCAGCCGCGGCCGTCATCGCCCGCTATGAGCCGGTCCTGCGCCGCGTGGAGCGACTGAGGTTCGCCTCCGACGAAGCGGCCGCCTCCGCTGAGCGGCATGACCGCCTGGTGGCGCTGTGCGCGGCCGGCGCCGCCGACGACGCCGCACGCCTCGCCGAGAGCGCCTGGCAGTCCCTCACCATCTCCCCCGCCCCCACTGAACAGGATCCCTCATGA
PROTEIN sequence
Length: 215
VPRALLRDDVHARLQEAIVDGSLAPGEQLRDAELAERLGVSRTPVREALLELAQAGLVQATPGRSTVVAPIDPGALRDAQAVVGALHALAVRTATPRMTTRDLDAMRAANAAFRAALSAGDIDGALEADARFHRVALEVCANAAAAAVIARYEPVLRRVERLRFASDEAAASAERHDRLVALCAAGAADDAARLAESAWQSLTISPAPTEQDPS*