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scnpilot_p_inoc_scaffold_995_1

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6..1757)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Microbacterium RepID=H8E186_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 591.0
  • Bit_score: 1020
  • Evalue 6.60e-295
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIC08906.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 591.0
  • Bit_score: 1020
  • Evalue 9.20e-295
hemagglutinin/hemolysin-like protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 460.0
  • Bit_score: 396
  • Evalue 1.70e-107

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGGACACGCCCGATCAGCCGCGCCCCGATGCCGACCTCGTGCTGCGCACGCGCGCCGGAGACCGTCAGGCGTTCGCCGAGCTGTGGCGCCGCCACTACCGGTCGGGGCTGACCGTCGCCTCGTCGATCACCTCGACCTTCGATGCCGAAGACCTCGTCCAGGAGGCGTACGCGCGCATCTACCAGGCGATCGCGAAGGGCGGGGGCCCGACCGGCTCTTTCCGCGCGTACCTGTTCACGAGTATCCGCAATACGGCCGCCGGGTGGGGCCGCGCCCGTCGTGAGACGGCCATCGACGAGCTCGAGGCGCTTGCCGATCCGGATGCCGACGCGCACGCGACCGACGAGGCGCTCGATCGGAGCCTCACGCACCGTGCGTTCCGGAGCCTGCCGACCCGGTGGCAGGAGGTGCTCTGGTACACCGAGATCGAGCAGATGAAGCCGGCGGAGATCGCTCCCCTGCTGGGGATGAAGTCGACCGCGGTGGCCCAGCTGGCCTTCCGTGCGCGCGAAGGCCTGCGTGAAGCGTGGATCCAGGCGCACCTGCAGACGGTGGCCGACGGGTCGGACTGTCAGTGGACCATCGAACGGCTCGGCGCCTACGCCCGTGACAACCTGGGGACCCGCGACCACAAGAAGCTCGAGGCGCACCTCGCCGATTGTGCGCGATGCACGATCGTGGCCGCCGAGGCCACCGAGGTCTCGCACCGTCTTGCCCTGGTGCTGCTGCCGTTGACGATCGGTGCGGGCGCTGCCACGGCCTACCTCGCCACCCTCCAGGGCGGCGCGGCTCCCTTGATCGCGCTGGCGGCGGGCGCGTCGGGGACCATGCCAGGCGCGGTGACGGTCGGGGCAGGCTCCGCACCGGTGGTCGGGTCGGCAAGCGGTGCCGGCGGGGCCGGCGCGGGCAGTTCCGCGGGAGCCGGAGGCTCGGCGGGCGGCGGTTCCGCGGGAGCCGGCGGCGCGGCCGGGGCTGCCGGATCCGCCGCGGGCGGCGGCGCGCTCGCCGGCGCGGGGGCCGTCGTCGGTCTGGTCGCGGCCGTCGCACTGGTGGCAGGGGCGGCGGTGGCGGCAGTGATCGTCGTGCCTCAGGTGATCGCCAGCAGCGCGTCCGCGCCGACGGACGGGTCGGGTGCCGAGGGGGGCGGCTCCGCGAACGGCGGGGGCGATGCGGTCGCCGCGCCTCCCGCGAGCACGCCCTCGCCGAGCACGGTGCCCTCTGCGGCCCCGACCGCGGTACCCCTGCCGTCGGCGACGGCGACGCCTGATGCGAAGCCGCAGCCCGCGCCGACGCGCCTTCCGGTCCTGCCGCCGATGCCGGCGCCGCAGCCGACGCCCGTTCCGACGCCGACGCCCACCCCGTCACCGACTCCGACTCCGACGCCGACGCCCACTCCGACACCGACACCCACGCCGACGCCGACACCAACCCCGGAACCGACACCGACTCCGGAACCCACACCGGTCCTTCCCGAGGGCTCACCCGCCTTCGGTCCGGCGAGTATCTCGACAGACGACGACCTGTTCGGCGCGCTAACGACGACGATCAACGGCGCACCCGGCAGCACGGTGACGGTGAAGTTCGGCGACGTTGAGCGAGCGCGGGTCACCCTGTCCGCCGAAGGCACGGCAGAGGGCACGATCGAGGGCACCGTCCTCGACTTCTGGTTCACGAAGATCTCGATTGCGTACATGGCAGGCGCCGCCGTGGGCCCGGCCACCGTTACCGACATCTGGCTCCTCGTCGGCTGA
PROTEIN sequence
Length: 584
MDTPDQPRPDADLVLRTRAGDRQAFAELWRRHYRSGLTVASSITSTFDAEDLVQEAYARIYQAIAKGGGPTGSFRAYLFTSIRNTAAGWGRARRETAIDELEALADPDADAHATDEALDRSLTHRAFRSLPTRWQEVLWYTEIEQMKPAEIAPLLGMKSTAVAQLAFRAREGLREAWIQAHLQTVADGSDCQWTIERLGAYARDNLGTRDHKKLEAHLADCARCTIVAAEATEVSHRLALVLLPLTIGAGAATAYLATLQGGAAPLIALAAGASGTMPGAVTVGAGSAPVVGSASGAGGAGAGSSAGAGGSAGGGSAGAGGAAGAAGSAAGGGALAGAGAVVGLVAAVALVAGAAVAAVIVVPQVIASSASAPTDGSGAEGGGSANGGGDAVAAPPASTPSPSTVPSAAPTAVPLPSATATPDAKPQPAPTRLPVLPPMPAPQPTPVPTPTPTPSPTPTPTPTPTPTPTPTPTPTPTPEPTPTPEPTPVLPEGSPAFGPASISTDDDLFGALTTTINGAPGSTVTVKFGDVERARVTLSAEGTAEGTIEGTVLDFWFTKISIAYMAGAAVGPATVTDIWLLVG*