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scnpilot_p_inoc_scaffold_1408_21

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(20655..21278)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9E2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 207.0
  • Bit_score: 391
  • Evalue 6.90e-106
  • rbh
Regulatory protein TetR {ECO:0000313|EMBL:EIC06409.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 207.0
  • Bit_score: 389
  • Evalue 2.80e-105
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 193.0
  • Bit_score: 235
  • Evalue 1.80e-59

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGACCACCCCCGCACCCCTTCGACGCCCGAGAAAGGATGCCGCCGCCAACCGTGCCGGCATCCTGCAGGCGGCTGCGACCACCCTGGCGCTCGACCCGTCTGCCTCGATCGACCAGATCGCCCGCGCCGCCGGATTGTCACGGCGTGCACTGTATGGACACTTCGACGACCGCCAGGCGCTGCTCACGGAGCTCATCGCCGCGGGCGCCCAGCGCTTCAACGCGATCGCCTCGTCGCTCGACGAGCCGCACCCTCCGCTCGCCCTGGCCCGGTTGACGGCGGCGCTGTGGACCGAGGCCGCGCATGTGCAGGTCGCCGCCGCTCTCGCGCTCGACGAGAGCCACCTCGAACAGACCGCTACCGCACTCGCACCTCTGCGGCGCGCCCTCGTCGATGTCGTCCGCGCCGGTCAGGACGACGGCACCCTCCGCGTCGACATGGCCGCCCCGACCCTCGCGCGTCTCATCGAAGAGACGGCGCGCGCCGCGGTCAGCCGCATCGACGCGTCGTCACCGATCGCGACCTCGCTCGCCGTGCGCGCCGTCCTCAGCATCGCCGGACTGTCCTGGCGCGAGTCCGAAGCGCTGCTGAACGCCCACCCCGATGTGCTGGAGGCGAACTGA
PROTEIN sequence
Length: 208
VTTPAPLRRPRKDAAANRAGILQAAATTLALDPSASIDQIARAAGLSRRALYGHFDDRQALLTELIAAGAQRFNAIASSLDEPHPPLALARLTAALWTEAAHVQVAAALALDESHLEQTATALAPLRRALVDVVRAGQDDGTLRVDMAAPTLARLIEETARAAVSRIDASSPIATSLAVRAVLSIAGLSWRESEALLNAHPDVLEAN*