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scnpilot_p_inoc_scaffold_2186_9

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6888..8375)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=2 Tax=Microbacterium RepID=H8E4K1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 471.0
  • Bit_score: 836
  • Evalue 1.10e-239
  • rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EXJ52779.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 471.0
  • Bit_score: 913
  • Evalue 1.30e-262
MocR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 473.0
  • Bit_score: 577
  • Evalue 3.50e-162

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
GTGCAGTCATGCAGCAATCCAATCTCACAATTGGACATCTACTACCAGTCCAATTCGGATACTGTGGCCACCATGGACTCGAGGATCGGGGCGCGGACGTTCGCCGGGATGCTGGGCGGGTGGCGCACGCGGGAGCCGGCGTATGAGGCCCTCGCCGACAGCATCCGCATCCTGTGCCTCGACAACCGCATCGCCGCGCACACCGCTCTTCCCGCCGAACGAGAACTCGCCGCTGCACTCTCGGTGAGCCGAACGACGGTCGCTGCGGCATATCGCAGCCTGCGCGACACCGGTCATATCGCAAGCCTTCGCGGATCGGGAAGCGTGACGACGGCGCGGCCGAGCCGTGACATCGGAGGCGCAGCGGCCACGACCGGCGCCATCGATTTGCAACAGGCCAGTCCCGCCGCGTGGCCGGGGCTCGCCGGCATCATCGCGGAGGCCGCGGCGGATGCCGCACGCATCGTCGCTCGGTCGGGCTATGACATCCGGGGCGCCATCGAACTCCGAGAAGCGATCGCAGACCGATACAGCGCACGCGGCATCCCGACCGACCCGAGCCAGATCGTCGTGACGACAGGTGCGCAGGCGGCGATCCACCTCCTGTCGACCGTTCTCGTCGGTCGTGGGGATCGGGTGGTCATCGAGAGGCCGACGTACCCCCATGCGGCCGAGGCGATTCGTGCCGCCGGCGCGCGACTGGTAGCTGTGCCGGTCACGATCGGCGGAGGCTGGGACCTCGATCGCGCGGCTCAAGTGTTCACACGAACGCAGCCACGGATGGCCTATCTGATGCCACGCTTCCAGAACCCGACGGGCCGCTCGATGACGGACGAGGAAGAGGCAGCCTTCGCACACGCTGCCCGCGCCTCGCGCGCCACTCTCGTCATCGACGAGACCACCGCCGATCTGACCATCGACGTTCCCGCCGCATCACCGGCGTTCGGCCACGATGCCGTGGTGCGCGTCGGCTCGCTCGGCAAGATCGTCTGGGGTGGTCTGCGCATCGGGTGGATCCGCGCGGACGGGGAACTCGTGCAGCGAATCGTCGCGGCGCGCCCCGCCAGGGAACTGGGCACACCGGATTTCGAGCAGGCGGTCGCCGCTCGTCTCTTCAGCCACCTGCCGGAGATTCTCACGCAGCGTTCTCTGCTGCTCAGATCGGGCCGAGACGCTCTCGTCGATGCGCTCACCCGCCGCCTGCCGGAGTGGAAGATCCCGCAGGTGCACGGCGGCGTGGCGCTCTGGGTGGAGCTGGATGCTCCTCTGAGCACGGGGCTCGTCCTCGCAGCCCGCGCCCATGGCGTTTCTCTCTCGTCCGGGTCGCGATTCGGGGTCGACGGGACGCACGACCGTCATCTCCGCCTGCCTTTCACGGCACCACCCGAGGAGCTCCGACGCGCCGTCGACACGCTCGCCGACGCGTGGCCCTCGGTGCGAGCCGCCGCCCCCGTGCACGGCGGCGAGATCCTCGACGCGGTGGTGTGA
PROTEIN sequence
Length: 496
VQSCSNPISQLDIYYQSNSDTVATMDSRIGARTFAGMLGGWRTREPAYEALADSIRILCLDNRIAAHTALPAERELAAALSVSRTTVAAAYRSLRDTGHIASLRGSGSVTTARPSRDIGGAAATTGAIDLQQASPAAWPGLAGIIAEAAADAARIVARSGYDIRGAIELREAIADRYSARGIPTDPSQIVVTTGAQAAIHLLSTVLVGRGDRVVIERPTYPHAAEAIRAAGARLVAVPVTIGGGWDLDRAAQVFTRTQPRMAYLMPRFQNPTGRSMTDEEEAAFAHAARASRATLVIDETTADLTIDVPAASPAFGHDAVVRVGSLGKIVWGGLRIGWIRADGELVQRIVAARPARELGTPDFEQAVAARLFSHLPEILTQRSLLLRSGRDALVDALTRRLPEWKIPQVHGGVALWVELDAPLSTGLVLAARAHGVSLSSGSRFGVDGTHDRHLRLPFTAPPEELRRAVDTLADAWPSVRAAAPVHGGEILDAVV*