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scnpilot_p_inoc_scaffold_2092_1

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..1184)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 394.0
  • Bit_score: 767
  • Evalue 7.30e-219
DNA-directed RNA polymerase subunit beta n=2 Tax=Microbacterium RepID=H8E543_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 394.0
  • Bit_score: 762
  • Evalue 2.80e-217
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 394.0
  • Bit_score: 716
  • Evalue 3.90e-204

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
TTGGCTGCTGCGCGCAACGCAACCAATTCCACCACCACCCCCAAGAACGGCCGCGGCGCATCGCGCCTGTCGTTCGCCAAGATCTCCGACACGCTGACGGTCCCCGACCTTCTCGCGCTGCAGACGGAGTCCTTCGACTGGCTCGTCGGCAACGACGCCTGGAAGGCCCGCGTCGCAGAGGCGAAGGAGGCCGGTCGCACCGACGTGCCCGAGACCAGCGGCCTCGAGGAGATCTTCGAGGAGATCTCGCCCATCGAGGACCTCGGCGAGACGATGCAGCTGAGCTTCACGAACCCCTACCTCGAGCCGGAGAAGTACTCGATCGAGGAGTGCAAGGAGCGCGGCAAGACCTACGCCGCCCCGCTGTACGTCGAGGCCGAGTTCATGAACCACCTCACCGGTGAGATCAAGACCCAGACCGTCTTCATGGGCGACTTCCCCCTGCAGACCGGCAAGGGCACGTTCATCATCAACGGCACCGAGCGCGTCGTCGTCTCGCAGCTGGTCCGCAGCCCCGGCGTCTACTTCGACAAGACGCCCGACAAGACCAGCGACAAGGACATCGTCTCCGCGCGCGTCATCCCGAGCCGCGGCGCCTGGCTCGAGTTCGAGATCGACAAGCGCGACCAGGTGGGCGTGCGCATCGACCGCAAGCGCAAGCAGTCGGTCACCGTCTTCCTCAAGGCCCTCGGCCTGTCCAGCGAAGACATCCTCGCCGAGTTCGCCGGCTACGAGTCGATCGCCGACACGCTGAGCAAGGACACGATCCTCACCAAGGAGGACGCGCTCCGCGACATCTACCGCAAGCTCCGTCCGGGCGAGCAGGTCGCCGCCGAGGCCGCCCGCGCGCTGCTGGACAACTTCTACTTCAACCCGAAGCGCTACGACCTGGCGAAGGTCGGTCGGTACAAGATCAACCAGAAGCTCGGCCTCGACAAGCCGCTCAGCGACTCGGTGCTCACCGTCGACGACATCGTCGCCACGATCAAGTACCTCGTCGCCCTGCACAACGGCGACGCGACGATCCCGGGTGTCCGGGGCGGCCAGCCCGCGGAGATCCGCCTGGACGTCGACGACATCGACAACTTCGGCAACCGTCGCATCCGCGCCGTCGGCGAGCTCATCCAGAACCAGGTCCGCACCGGTCTGTCGCGCATGGAGCGCGTCGTCCGCGAGCGCATG
PROTEIN sequence
Length: 394
LAAARNATNSTTTPKNGRGASRLSFAKISDTLTVPDLLALQTESFDWLVGNDAWKARVAEAKEAGRTDVPETSGLEEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAPLYVEAEFMNHLTGEIKTQTVFMGDFPLQTGKGTFIINGTERVVVSQLVRSPGVYFDKTPDKTSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLSSEDILAEFAGYESIADTLSKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGRYKINQKLGLDKPLSDSVLTVDDIVATIKYLVALHNGDATIPGVRGGQPAEIRLDVDDIDNFGNRRIRAVGELIQNQVRTGLSRMERVVRERM