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scnpilot_p_inoc_scaffold_2092_15

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(14092..14499)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCC0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 98.0
  • Bit_score: 149
  • Evalue 3.00e-33
branched-chain amino acid transport system permease protein LivM similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 98.0
  • Bit_score: 149
  • Evalue 8.40e-34
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:AEQ53714.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 98.0
  • Bit_score: 149
  • Evalue 4.20e-33

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Taxonomy

Pelagibacterium halotolerans → Pelagibacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ACCGCCGCCTTCTTCGGCATCGGCGCCTACACGATGGCGGCACTGTCCGAGGCAATGCCGCTCACGGCAGTCATCCTGGTCGCGGCGCTGGTCGGCGTCGTGGTGGCCCTGGTGGTCGGCTTGTCGACGCTACGGCTGAGGGGCATCTTCTTCGTCATCTTCACCTTCGGCCTCGCAGAGCTGATCCGCCAGATCGTCGCCTGGTACGAAGTCAAGGTCTCGCACACGGTTGGTCGCTATATCTTCCTCGACGTTGGCCAGGAGCAGATCTTCTGGGAACTGCTCGGGCTGGCCGATCGCATCTACACCATCTCCGAAGGCCGCATCTCCGGCGAGCTCGAGCGCGCCGAGGCCACGCAAGAACGACTCATGCACTTCATGACAGCGGGAAAGGACCTGGCCCGATGA
PROTEIN sequence
Length: 136
TAAFFGIGAYTMAALSEAMPLTAVILVAALVGVVVALVVGLSTLRLRGIFFVIFTFGLAELIRQIVAWYEVKVSHTVGRYIFLDVGQEQIFWELLGLADRIYTISEGRISGELERAEATQERLMHFMTAGKDLAR*