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scnpilot_p_inoc_scaffold_3195_10

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 8437..9336

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 298.0
  • Bit_score: 559
  • Evalue 2.80e-156
HTH-type transcriptional regulator CatM {ECO:0000313|EMBL:KJL37357.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsen similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 298.0
  • Bit_score: 559
  • Evalue 3.90e-156
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 288.0
  • Bit_score: 316
  • Evalue 8.80e-84

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGATCTGCAGCAGCTGCGCGCCTTCCTCGCTGTCGCCGATGAACTGCATTTCGGGCGCGCCGCAGAGCGCCTCCACATGGCGCAACCGCCGATCAGCCGCGGCATCCAGCAGCTGGAGCGGGAATTGGGCGCGCGATTGTTCGAACGGAGCACTCGCAAGGTCACGCTGACCTCCGTCGGAGAGGCGCTGATCGCACCCGCCCAGGAGGTGCTGGACGCCCTGGATCGGGTGAGCAGAGTCGCCCGGGCGGCCGGAACGGGCGAGATCGGCCACGTCAGGCTGGCGTATGCGGGCGCGTCCTCCAACGTGATGGTCGGACAGCTCGCCCGCGCCGTCAACCAGAACCCCCCGGGCATCCACCTCGAACTGCTCAGTCAGCACTTCGCCCAGCCTGCGATGCAACTGCTGACCCGTGGCGACATCGATATCGCACTCGGCCGATGGGATCACATTCCCGCCATCGTGCGCACCCGCGTGATCGCCATCGAGGAACTGGTCATCGCCGTCCCTGAGACCCACCGCCTCGCCGACGCCGATGCCGTGTCGATCGCGCAGTTCGAGGGGGAACCGTTCGTATCGCTGCAGCCCCAGACCGGGACGCTACTGCTGGAAAGGCTTCGGCAGATGAGCAGAGCGGCCGGGTTCAACGCGGACGTCGTCCAGCACGCACCGGACTCATGGACGCTGATGTCACTCGTCTCCGCCGAGATCGGCTGCTCATTGACCCTATCCTCCGTGATCGACAGCATCGCCGACCCGCACCTGCGCTTCCTACGCCTCACCGACGACGCTCCACCCGTCGAACTGCGGATGGCCTGGCTGCGCGACAGCGACGATCGCGCGCTGCACGCCGTGCTCCGGCTGTCCGAATCCGTCCTCCCGACCCCGCAGACATAG
PROTEIN sequence
Length: 300
MDLQQLRAFLAVADELHFGRAAERLHMAQPPISRGIQQLERELGARLFERSTRKVTLTSVGEALIAPAQEVLDALDRVSRVARAAGTGEIGHVRLAYAGASSNVMVGQLARAVNQNPPGIHLELLSQHFAQPAMQLLTRGDIDIALGRWDHIPAIVRTRVIAIEELVIAVPETHRLADADAVSIAQFEGEPFVSLQPQTGTLLLERLRQMSRAAGFNADVVQHAPDSWTLMSLVSAEIGCSLTLSSVIDSIADPHLRFLRLTDDAPPVELRMAWLRDSDDRALHAVLRLSESVLPTPQT*