ggKbase home page

scnpilot_p_inoc_scaffold_8258_4

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2734..3582)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LuxR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Q0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 282.0
  • Bit_score: 531
  • Evalue 4.50e-148
  • rbh
DNA-binding protein {ECO:0000313|EMBL:EXJ50886.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 282.0
  • Bit_score: 539
  • Evalue 2.30e-150
DNA-binding HTH domain-containing proteins similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 283.0
  • Bit_score: 347
  • Evalue 3.40e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGCGACGCCGACCCCGCTCACTGACAGTGATCTGCTGGCCCATGCCGTCGAGGATCTGGCCACACGGACGGGCCTTCCCGTCGCCTTCGGCGGTTTCGAGCGGGCAAACGCGGTCGAGGTCACCTCGGTCGTCGGAAACCGCACCCCGCACCTGTCCGGACTCGTCGTGCACGCCAGCCGCGGGCTCGGCGGGCGGGCGCTCGTGGAGCGGCGCCCGCGACTCGCTCTCGACTACCGGTCTTCGCGCAACATCACCCACGATTACGATCGCGCGATCCTCGGCGAGGGGATCTCGACGCTGTTCGCCGTGCCCGTGCTCGTCGCCGGGCGCGCACGCGGCGTGCTCTACTGCGGTTCGTGGTCGCCGTCCCCCTTCGGAGAGTCCACCGCACGCATGGCGCTCCAGGTCGCCAGCGATCTGGCGACGGAGCTTCGCGTCAGAGAAGAAGTGCAGCGGCGACTCACCCTCGCTCCGGCATCCACCTCGGGCGTCGACCCCGTGCTGCGCGAGCACCTGCGCGACACGTACGCGCAGTTGCGCCGCATCGCCGCCGATGTGCCCGACGCCGCCATCCGGCGCCGTCTCGCCGAGATCGAACAGCGCCTCGCCGATCTGACCCGCGACGACAGTGCGACCACGGAGACGCTCGACGTGAAGCTGTCGCCGCGAGAGATCGATGTGCTCGCGTGCGCGGCACTGGGCCAGACCAACGCCGAGATCGCTGTCGCACTCGGCTTGCGGGAGGGCACCGTCAAGTCGTATCTGCAGTCGGCGATGGCCAAACTCGACACGGGCACGCGCCACGCCGCGGTGACACGGGCGCGACGCGCGGGACTGCTCCCCTGA
PROTEIN sequence
Length: 283
MATPTPLTDSDLLAHAVEDLATRTGLPVAFGGFERANAVEVTSVVGNRTPHLSGLVVHASRGLGGRALVERRPRLALDYRSSRNITHDYDRAILGEGISTLFAVPVLVAGRARGVLYCGSWSPSPFGESTARMALQVASDLATELRVREEVQRRLTLAPASTSGVDPVLREHLRDTYAQLRRIAADVPDAAIRRRLAEIEQRLADLTRDDSATTETLDVKLSPREIDVLACAALGQTNAEIAVALGLREGTVKSYLQSAMAKLDTGTRHAAVTRARRAGLLP*