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scnpilot_p_inoc_scaffold_11729_5

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3988..4185

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5D895 similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 66.0
  • Bit_score: 103
  • Evalue 9.20e-20
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:KJL39028.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 66.0
  • Bit_score: 124
  • Evalue 7.10e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 60.0
  • Bit_score: 72
  • Evalue 4.90e-11

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGACCAGTTCGTCACCGCGAGCCGGGGCGTTCGGCGACGAGCTGACGAACCTCGCCCTCGGCGCGCTCATCGGTGCGTTGCTGCTGGCCGGTGCGCTGCGCTTGGCCGGGAGCATCGCTGCGTTCGTCACGGGCGCGCCCCAGCCCGCGGCGGGTCTCGAAGCGGGAGTCGGAGTGGTCTTCCGCGCCGACGACCCC
PROTEIN sequence
Length: 66
MTSSSPRAGAFGDELTNLALGALIGALLLAGALRLAGSIAAFVTGAPQPAAGLEAGVGVVFRADDP